Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85745 |
Symbol | FUM1 |
ID | 4840804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 499269 |
End bp | 501371 |
Gene Length | 2103 bp |
Protein Length | 463 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392119 |
Product | fumarase |
Protein accession | XP_001386687 |
Protein GI | 126140330 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAAGTAAAAG AGAACATTTC TTGAAAAATT CATGAGAAGC TGAACGGGTA CATACAGTGA AACTCTAAAC TATCACAATG AATGATTCAG AGATTTCACA TTTTTCAATC GCCGATATCT TCCTGTTGCA ACCGTGTGCC ACCGGCTACG CCCGTCTCCC CCCTCATGTT GCAACACCAT CAGACTAATC CTGGCCCGGG ACCATTGTTC CACTATGTAT CTATACTTGC ACCGGGACAT CATGCCGAAA TTGCGCACTA CTATCGGAAC AAAATTCCGA TGGTTGAAAA AAAGTTTTGG TGCCCTGTAC TGCGATGAAG CTCAACTGAA TTGACACTAC TTTTACCCAA CTAGTACTAA TTTAAAGTTC TAGTGGTGCT ATACCAATTG TATATAATTG CAAGTTCGAG TTCAATTCTT TGATTTCCAA CTTCTTCTTA AATTTGTGCA ATTCAAATCA CAACCATGTC CACCAGAATC GAAACTGATG CCTTCGGCGA AATAGCCGTG TCCACCGATA AGTACTGGGG AGCACAGAGT CAGAGATCTT TGGGCAACTT TGATATCGGC GACATCAGAA TGCCTGAACC AATTGTTAAA TCGTTTGGGA TCTTGAAGAA GGCCGCAGCA ACAGTCAATG AAGAATTAGG AGTCTTGGAT CCAAAACTTG CTAAAGCTAT TAGGGAAGCA GCTTCGGAAG TCGCTGATGG AAAATTGACA GCCCATTTTC CGTTGGTCGT CTACCAGACT GGCTCAGGTA CTCAATCCAA TATGAATGCT AACGAAGTCA TCTCCAACAG AGCCATTGAG CTCTTGGGAG GGGTTATGGG CTCCAAGAAG CCAGTCCATC CCAACGATCA CGTCAACATG TCGCAATCCT CTAATGACAC TTTCCCTACA GTGATGCACA TAGCTGCTGT CATCGAGGTC TCGAACCAGT TGTTGCCCAA GTTGAGAGAC TTGAAAACTG CTTTTGAAAA GAAAGCCGAC GAATTCAAGG ATATCATAAA AATCGGTAGA ACTCATTTGC AAGATGCTAC ACCCTTGACG TTAGGCCAAG AATTCTCAGG CTACGTCCAG CAGATCGCCT TTGGCATTGA AAGAATCGAA CAGACTTTAC CAAGATTGTC GTATTTGGCG CAGGGTGGTA CTGCCGTCGG TACTGGACTC AACACCAAGA AAGGATTTGA CGTTAAGGTC GCTGCAGAGG TCTCTAAACT TACAGGCTTG GAATTCAAGA CGGCTCCAAA CAAGTTTGAA GCTCTTGCCG CCCATGATGC CTTTGTTGAG ACATCTGGAG CTTTGAATAC CGTAGCTGTG TCTTTGTTCA AGATTGCCAA CGATGTCAGA TACTTGGGTT CTGGCCCCAG ATGTGGATAT GGTGAGTTGT CGTTACCAGA AAACGAACCG GGTTCTTCCA TCATGCCTGG CAAAGTCAAC CCTACCCAAT GTGAAGCTAT GACTATGGTC TGTGCTCAGG TTATGGGAAA CCACACTACG ATTACATTCT CCGGTGCTTC AGGCCAGTTT GAATTGAATG TGTTCAAACC AGTCATGGCC TACAACTTGT TGACTTCCAT CAGATTGCTC GGAGACGCTG CCAAGTCATT CAGAATCAAC TGTGTCGAAG GAATTGTAGC CAACAAGGAG AAGATCGCTA AGGTATTGAA CGAGTCATTG ATGTTGGTCA CTGCCTTGAA CCCCAAGATT GGCTACGACA ACGCCTCCAA GGTTGCTAAA AACGCTCACA AGAAGGGCAT TACCTTGAAG GAATCGTGCT TGGAGTTGAA TATGTTGACA TCCGAAGAGT TTGACCAGTG GGTCAGACCA GAGAACATGA TTGGTCCAAA GGACTAGTTA TATGTAAAAC AGTGATAACT ATTAATTACT CAATCTATGA AATGTGTATG ATTTAATCGT AGCATCATGA AGGATATTTA ATGAATTAAT CAATCAATGA ACTCAGTATA CAGTAGTTTG TAGGTATAGA CAAAGTGAAT CTTCACTTTT AATGTGAATG TAGTCTACGA CGCTATGGAT TGCACGTCAT CTCTTTCACT GAAAGCAACA TAATCTCTAT TCTTACCCAC GGGAAACCTC TTT
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Protein sequence | MSTRIETDAF GEIAVSTDKY WGAQSQRSLG NFDIGDIRMP EPIVKSFGIL KKAAATVNEE LGVLDPKLAK AIREAASEVA DGKLTAHFPL VVYQTGSGTQ SNMNANEVIS NRAIELLGGV MGSKKPVHPN DHVNMSQSSN DTFPTVMHIA AVIEVSNQLL PKLRDLKTAF EKKADEFKDI IKIGRTHLQD ATPLTLGQEF SGYVQQIAFG IERIEQTLPR LSYLAQGGTA VGTGLNTKKG FDVKVAAEVS KLTGLEFKTA PNKFEALAAH DAFVETSGAL NTVAVSLFKI ANDVRYLGSG PRCGYGELSL PENEPGSSIM PGKVNPTQCE AMTMVCAQVM GNHTTITFSG ASGQFELNVF KPVMAYNLLT SIRLLGDAAK SFRINCVEGI VANKEKIAKV LNESLMLVTA LNPKIGYDNA SKVAKNAHKK GITLKESCLE LNMLTSEEFD QWVRPENMIG PKD
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