Gene PICST_85745 details

Gene Information

• Locus tag: PICST_85745
• Symbol: FUM1
• ID: 4840804
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009048
• Strand: -
• Start bp: 499269
• End bp: 501371
• Gene Length: 2103 bp
• Protein Length: 463 aa
• Translation table: 12
• GC content: 44%
• IMG OID: 640392119
• Product: fumarase
• Protein accession: XP_001386687
• Protein GI: 126140330
• COG category: [C] Energy production and conversion
• COG ID: [COG0114] Fumarase
• TIGRFAM ID: [TIGR00979] fumarate hydratase, class II

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GAAGTAAAAG AGAACATTTC TTGAAAAATT CATGAGAAGC TGAACGGGTA CATACAGTGA 
AACTCTAAAC TATCACAATG AATGATTCAG AGATTTCACA TTTTTCAATC GCCGATATCT 
TCCTGTTGCA ACCGTGTGCC ACCGGCTACG CCCGTCTCCC CCCTCATGTT GCAACACCAT 
CAGACTAATC CTGGCCCGGG ACCATTGTTC CACTATGTAT CTATACTTGC ACCGGGACAT 
CATGCCGAAA TTGCGCACTA CTATCGGAAC AAAATTCCGA TGGTTGAAAA AAAGTTTTGG 
TGCCCTGTAC TGCGATGAAG CTCAACTGAA TTGACACTAC TTTTACCCAA CTAGTACTAA 
TTTAAAGTTC TAGTGGTGCT ATACCAATTG TATATAATTG CAAGTTCGAG TTCAATTCTT 
TGATTTCCAA CTTCTTCTTA AATTTGTGCA ATTCAAATCA CAACCATGTC CACCAGAATC 
GAAACTGATG CCTTCGGCGA AATAGCCGTG TCCACCGATA AGTACTGGGG AGCACAGAGT 
CAGAGATCTT TGGGCAACTT TGATATCGGC GACATCAGAA TGCCTGAACC AATTGTTAAA 
TCGTTTGGGA TCTTGAAGAA GGCCGCAGCA ACAGTCAATG AAGAATTAGG AGTCTTGGAT 
CCAAAACTTG CTAAAGCTAT TAGGGAAGCA GCTTCGGAAG TCGCTGATGG AAAATTGACA 
GCCCATTTTC CGTTGGTCGT CTACCAGACT GGCTCAGGTA CTCAATCCAA TATGAATGCT 
AACGAAGTCA TCTCCAACAG AGCCATTGAG CTCTTGGGAG GGGTTATGGG CTCCAAGAAG 
CCAGTCCATC CCAACGATCA CGTCAACATG TCGCAATCCT CTAATGACAC TTTCCCTACA 
GTGATGCACA TAGCTGCTGT CATCGAGGTC TCGAACCAGT TGTTGCCCAA GTTGAGAGAC 
TTGAAAACTG CTTTTGAAAA GAAAGCCGAC GAATTCAAGG ATATCATAAA AATCGGTAGA 
ACTCATTTGC AAGATGCTAC ACCCTTGACG TTAGGCCAAG AATTCTCAGG CTACGTCCAG 
CAGATCGCCT TTGGCATTGA AAGAATCGAA CAGACTTTAC CAAGATTGTC GTATTTGGCG 
CAGGGTGGTA CTGCCGTCGG TACTGGACTC AACACCAAGA AAGGATTTGA CGTTAAGGTC 
GCTGCAGAGG TCTCTAAACT TACAGGCTTG GAATTCAAGA CGGCTCCAAA CAAGTTTGAA 
GCTCTTGCCG CCCATGATGC CTTTGTTGAG ACATCTGGAG CTTTGAATAC CGTAGCTGTG 
TCTTTGTTCA AGATTGCCAA CGATGTCAGA TACTTGGGTT CTGGCCCCAG ATGTGGATAT 
GGTGAGTTGT CGTTACCAGA AAACGAACCG GGTTCTTCCA TCATGCCTGG CAAAGTCAAC 
CCTACCCAAT GTGAAGCTAT GACTATGGTC TGTGCTCAGG TTATGGGAAA CCACACTACG 
ATTACATTCT CCGGTGCTTC AGGCCAGTTT GAATTGAATG TGTTCAAACC AGTCATGGCC 
TACAACTTGT TGACTTCCAT CAGATTGCTC GGAGACGCTG CCAAGTCATT CAGAATCAAC 
TGTGTCGAAG GAATTGTAGC CAACAAGGAG AAGATCGCTA AGGTATTGAA CGAGTCATTG 
ATGTTGGTCA CTGCCTTGAA CCCCAAGATT GGCTACGACA ACGCCTCCAA GGTTGCTAAA 
AACGCTCACA AGAAGGGCAT TACCTTGAAG GAATCGTGCT TGGAGTTGAA TATGTTGACA 
TCCGAAGAGT TTGACCAGTG GGTCAGACCA GAGAACATGA TTGGTCCAAA GGACTAGTTA 
TATGTAAAAC AGTGATAACT ATTAATTACT CAATCTATGA AATGTGTATG ATTTAATCGT 
AGCATCATGA AGGATATTTA ATGAATTAAT CAATCAATGA ACTCAGTATA CAGTAGTTTG 
TAGGTATAGA CAAAGTGAAT CTTCACTTTT AATGTGAATG TAGTCTACGA CGCTATGGAT 
TGCACGTCAT CTCTTTCACT GAAAGCAACA TAATCTCTAT TCTTACCCAC GGGAAACCTC 
TTT 

 

Protein sequence

MSTRIETDAF GEIAVSTDKY WGAQSQRSLG NFDIGDIRMP EPIVKSFGIL KKAAATVNEE 
LGVLDPKLAK AIREAASEVA DGKLTAHFPL VVYQTGSGTQ SNMNANEVIS NRAIELLGGV 
MGSKKPVHPN DHVNMSQSSN DTFPTVMHIA AVIEVSNQLL PKLRDLKTAF EKKADEFKDI 
IKIGRTHLQD ATPLTLGQEF SGYVQQIAFG IERIEQTLPR LSYLAQGGTA VGTGLNTKKG 
FDVKVAAEVS KLTGLEFKTA PNKFEALAAH DAFVETSGAL NTVAVSLFKI ANDVRYLGSG 
PRCGYGELSL PENEPGSSIM PGKVNPTQCE AMTMVCAQVM GNHTTITFSG ASGQFELNVF 
KPVMAYNLLT SIRLLGDAAK SFRINCVEGI VANKEKIAKV LNESLMLVTA LNPKIGYDNA 
SKVAKNAHKK GITLKESCLE LNMLTSEEFD QWVRPENMIG PKD