| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85638 |
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| Symbol | GEA2 |
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| ID | 4841061 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 358740 |
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| End bp | 363197 |
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| Gene Length | 4458 bp |
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| Protein Length | 1420 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640392376 |
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| Product | GDP/GTP exchange factor for ARF |
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| Protein accession | XP_001386656 |
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| Protein GI | 150866905 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5307] SEC7 domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.648064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATGTGGCCA TCGATCCCAT AACGTTGATG ATCAACGAGT GTATGACCAT CTCGTCTGCC
ATGAGAAAGA TGACTCGTTA TTCCCAAAGT GGAGTAGCAG CTATTCTTGG GGCTGGAGAT
CTCTTCAATG GCGAAGACGA TGCCATTGCC AACAGCTTGG GTTTGTCATC CACCGTCAAC
AACTCCAACA ATGGCCACCG TCAAAGCAAC CACAATCCTT TACTCTCCAG CTTCTTACAA
TTGAGATCCA TCTTGATGGA AGCCAAAGAT TTGTACGAAA TTGACAGCTT GACGTTGTTA
CAGCCTTTTT TGCTTGTTAT TAAGTCGTCG TCAACTTCTG GCCACATAAC CAGCTTGGCT
CTAAACTCGG TATCCAAATT CTTGAACTAC GAAATCATCT CCTACAAGTC GAGGAATTTG
CAGAGCACTT TAATCCAAAT CATGTCGTCC TTGACTGTAT GTCGTTTTGA GGCTGCCGAC
CAGAACTCTG ATGATGCCGT GTTGTTAAAG GTCCTCAGAT TGATGGAAGC CATCATTGAG
AGCCCGTTGT CTGACTTGTT GCCCAATGAA GTCATCTCCG ATGTAGTACA AATCTGCTTA
TCCTTGGCAT GTAATAAAAA GAGAAGTGAA GTATTGAGAA AGGCTGCAGA AATGGCCATG
GTCTCGATTA CTTTCAGAAT ATTCAGTCAA TTGAAATACA TTGAACCAGA AACTGAAAGC
GTCGAAGAAT TGCAGGCGAA CTTTCAAGAC ACCAAGTTAC CTGAAGACAT TATAGGAGGA
ACTGATATAA AGCCGTCTGT TGCTGGAACG CCGAAGACGT CAGAAGATGA AACAGACGAA
CAAAAGAAGA AGACTTCGGC CCCAAATAAA GAGGAAGTAG CCGATGAAGA AGAGTCTTTT
GGTATTCTCT GTATCAATGA GTTTTTGGGT GTTTTGATCT ACATGATTTC TCCGTCTAAC
CAATATCAAC ACATGGAAAG TACTAGAGTA TTTGCATTAT CCCTCATTAA TACTGCAATA
GAGGTAGCTG GACAAGAGAT ACCTAAACAT CCAACTTTGA TCTTGTTGGT TTCTGACTTA
GTTTCCAAGC ATGTCTTACA AATTATTACA ACAACTGAGT CGCCAGCATT ATTACAGGCT
GCTCTCCAAT TGTTTTCAAC TGTCGCAATC GTTCTTGGAA GACTGTTGAA GTCACAATTT
GAGTTGACAT TGACCTTAAT ATTTCAGTCC ATTTTGCCAG ATTCAGGAAA GAGACAAAAT
GATACTATCA ATGGTGCAAA TGTTTCAACT AGAAATTCTT CCTCTAAAGA GATGTTGGTA
GAATCTCTTT CCTTGTTATG GACTAGATCT CCAGTTTTCT TCACTCACTT ATTCATAGAC
TACGACTGTG ACTTTGACAA GTCTGATTTG GCTACCAAGT TCATCGAGTT CTTGTGCCAA
CTCTCATTAC CAGAGTCTGC CGTTACCACC ACTGATAATG TTCCACCAAT CTGCTTGGAA
GGAATTTTGT CATTGATTGG CGGTATCAAC GACAGAATTA AATCCTTGAA GAGTGATTTA
AATGATGCTC CACTTCACTC GATGATTAAT GATAGAGAAA AGAAGACATT ATTCATTAAG
TGTACCGATC TATTAAATGA TAAACCAAAA GAAGGCGTCA AAGCATTAGA AAAGGAAGGA
TTTATTAAGT CCGCAAGCGA CCTTAAGGAA GTCGCTTCCT TCTTTTTCCA TAAGTCAGGT
AGATTGAACA AGAAGGTGTT AGGTGAATTT TTAGCAAAGC CTTCGAACTC GGATTTGTTA
CGGTACTTCA TTGACCTATT TGATTTTACG GACCTAAGAG TTGATGAAGC CTTGCGAATC
TTGTTGAAAG CTTTCAGATT ACCCGGGGAA TCTCAGCAGA TTGAAAGGGT GGTTGAATTA
TTTGCTCAAA GATACGTTGA TTGTCAACCG GAACTTGTCG ATGGCCAGGA CATGGACGAA
ATCGTAAGGC CAGATCGTGA CTCTGTCTTT GTGTTATCGT ACTCCGTCAT TATGTTGAAT
ACTGACTTGC ACAACCCACA GGTTAAACAG CAAATGGTGC TTGACGACTA CAGGAGAAAC
TTAAGAGGGG TATACAATGG AAGGGACTTC CCGGAATGGT ATTTGTCAAA AATTTACAAC
TCCATCAAAG ACCGTGAGAT CATTATGCCT GAAGAGCATC ATGGTACTGA TAAATGGTTC
GATGACGTAT GGCATAACTT GATTTCAAGT CTTGCGCCAA CAAGTAAAGA CAAATCCGAG
TTTTCTTGGG TGGAGATATG TCAGTTTGAT AAAGTGTTGT TTAAGGCAGT TGTTGATACT
TTAATTGATA CACTTGTTGG TGTGTTCAAA GAAGCTTCTG ATGATCATAT TATCACCAGA
TTAATGTCTT CAATAGATAA GTGCGCTAAC ATTTGTTTGT ATTACAATCT ATCTGATTCC
GTTGATCGTT TGTTGAATGC TTTGACAGAC TTAACATCTT TGACCAATAA AAGCTACAGG
ATTTCTGGGA CTGACGATAA CTTACGAGAG GAAATACCAA TTACTCAAAT CAAGATCGAA
AAGAAAGAAG AAGCCATTAC TGTCAGTGAA ATGGCCGTTT GGTTTGGTAG AGATTTTAAG
GCTCAATTGT CGACGGTCGT TCTATTCAGA TTAATCAAGA AGACTGACAG CAAGATTACT
CAGTCTTGGG GTAAGATCAT AAAGATTATT TTGACATTGT TTGAGAATTG TTTGATAAAT
CCTAACTTGT TCAGCGAATT TCAAAAGAAA ATCAAGCTTA GTCCATTACC TAAAGTTAAG
CCAAGATATA TCATCAAGAG GGTTAAGCCA TTGAATAATT CTGGTATCTT GTCGACGTTC
TCGTCATTCT TGAAGGGCTA TTCTGATGAT CCTCCTGAGC CCACAGATCA TGAAATTGAG
TCCACCTTGT CCACTATCGA CTGTGTGAAA TCCATTAACG TACCAGCCAT CTTCGAGGTT
GTATCCAAGG GACCACCTGA TGACTTAAAA TATTTTGTTA AACTCGTTTT GAATTCGTTG
CCAGAGTATA GTAAGGATAC AAAAAGATAT TATGAGACAG AAATTCTCTT TTTGTTGGAA
ATTGCGGTCT GTTTCTGTTT GTTATTAGAT GATATTGAAT TGATTACTGA AGTCTCGGAC
AAGCTCAACC CACCAGAAAT ATCCAAGAAG GGCCAACTTA GATTAATTGC ATACAAGTTA
CTTTTGGCCA GACGTGGTAA TTCGAAGATT AACGTTTCTG CTTCCATTAA GACTTTAGCT
GAGTTTGATA AGGAAATCAT TAACAAGCAA GGCGGTCAAT TACTTCAACC ATTGTTATCC
TTGATTGATG ATGACGCTTG GTGTTGTAAG GAATTGTTAA ATGACAATGA ATACTGGAAA
GTATTAAGGT TCTTTGCTTC TATCCAAATT TATGCATCTG ATATTCTCGA ATTCATGTCT
GGAATTGTCA AGAATGCTCC TCAGGACATA ACGCCATCTA ATTATATTGC ATTTTTGGGA
TTACTTGATG AGATTTCCTC CTTAGGAGCT ATTGGCTCTC AGTACGAACA AGAGAATGAA
AAGCTCGGTT CGAATCAAGA CATAACTTAC TTCAAGGACT TGGTGGAACT TTCCAAGAAA
TCAATATCAT TGACTTCTGA ATTATCTGCT GTGATAAAGA GACCAGAATT CAAGGGCAAG
GAATTGACCT ACACATTGAT TCAAGCATTG GCACACCAGT GTTTCAATCC ATGTCGCGAT
GTTCGTTCTT TTGCTTTGAA CTCCTTGCAA GCAATGGTTT TATCTATTGA CATCAACGAA
GAGTTAACTG CATTTGGAAT ATTCGAGTAT GGATTGTTTC CATTGTTATC GGAATTGTCC
AAGAGTGAAG TTTTGCAAAC CGATATTCAC GGTTTTGTCA AGACGCAGAC TGAAACATTG
ACCTTGGTCA GCAAGGTTTA TCTTCACTAC TGTGTCGACT TGAAGCAGGA AGAAACTGAC
GGTGTTTGGT TAGGAATATT GGATAACTTT ATTACATTCC ACGACCAAGA AAGCAAGCTC
AAGAAAGAGA ATTCGTTCAA AGAAGCAGGA GCCGAATTAC TCAAAAACAT GATTCTAGTA
CTACAAGACA ATGGTACTTT GAGCAAGGAC AAAGAGATCC TCTGGAACGA ATCATGGCTG
AAGATAGATA AGATTTATCC CGGTTTAAGA GACGAATTGG ATCCGGAGCC GTTGTCTGAG
AAGAATAAAG AGAATATAGT CGACACGGCT GCTGAGGGTG GAGAAGAGAA GAAAATCGAA
ACAGACGGAG ATAACTAATC TGCAATAAAT ATTACACTTA TGTAATCTAA TGGTTTCTTA
AGAAAGTAGT CGTTATGGAG AAGTAGTATT TTGTATTTTA GTTACTTTCA TAAATATAGC
AAGCTTATGT TGCATCTC
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| Protein sequence | MINECMTISS AMRKMTRYSQ SGVAAILGAG DLFNGEDDAI ANSLGLSSTV NNSNNGHRQS
NHNPLLSSFL QLRSILMEAK DLYEIDSLTL LQPFLLVIKS SSTSGHITSL ALNSVSKFLN
YEIISYKSRN LQSTLIQIMS SLTVCRFEAA DQNSDDAVLL KVLRLMEAII ESPLSDLLPN
EVISDVVQIC LSLACNKKRS EVLRKAAEMA MVSITFRIFS QLKYIEPETE SVEELQANFQ
DTKLPEDIIG GTDIKPSKKT SAPNKEEVAD EEESFGILCI NEFLGVLIYM ISPSNQYQHM
ESTRVFALSL INTAIEVAGQ EIPKHPTLIL LVSDLVSKHV LQIITTTESP ALLQAALQLF
STVAIVLGRS LKSQFELTLT LIFQSILPDS GKRQNDTING ANVSTRNSSS KEMLVESLSL
LWTRSPVFFT HLFIDYDCDF DKSDLATKFI EFLCQLSLPE SAVTTTDNVP PICLEGILSL
IGGINDRIKS LKSDLNDAPL HSMINDREKK TLFIKCTDLL NDKPKEGVKA LEKEGFIKSA
SDLKEVASFF FHKSGRLNKK VLGEFLAKPS NSDLLRYFID LFDFTDLRVD EALRILLKAF
RLPGESQQIE RVVELFAQRY VDCQPELVDG QDMDEIVRPD RDSVFVLSYS VIMLNTDLHN
PQVKQQMVLD DYRRNLRGVY NGRDFPEWYL SKIYNSIKDR EIIMPEEHHG TDKWFDDVWH
NLISSLAPTS KDKSEFSWVE ICQFDKVLFK AVVDTLIDTL VGVFKEASDD HIITRLMSSI
DKCANICLYY NLSDSVDRLL NALTDLTSLT NKSYRISGTD DNLREEIPIT QIKIEKKEEA
ITVSEMAVWF GRDFKAQLST VVLFRLIKKT DSKITQSWGK IIKIILTLFE NCLINPNLFS
EFQKKIKLSP LPKVKPRYII KRVKPLNNSG ILSTFSSFLK GYSDDPPEPT DHEIESTLST
IDCVKSINVP AIFEVVSKGP PDDLKYFVKL VLNSLPEYSK DTKRYYETEI LFLLEIAVCF
CLLLDDIELI TEVSDKLNPP EISKKGQLRL IAYKLLLARR GNSKINVSAS IKTLAEFDKE
IINKQGGQLL QPLLSLIDDD AWCCKELLND NEYWKVLRFF ASIQIYASDI LEFMSGIVKN
APQDITPSNY IAFLGLLDEI SSLGAIGSQY EQENEKLGSN QDITYFKDLV ELSKKSISLT
SELSAVIKRP EFKGKELTYT LIQALAHQCF NPCRDVRSFA LNSLQAMVLS IDINEELTAF
GIFEYGLFPL LSELSKSEVL QTDIHGFVKT QTETLTLVSK VYLHYCVDLK QEETDGVWLG
ILDNFITFHD QESKLKKENS FKEAGAELLK NMILVLQDNG TLSKDKEILW NESWSKIDKI
YPGLRDELDP EPLSEKNKEN IVDTAAEGGE EKKIETDGDN
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