Gene PICST_85593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85593 
SymbolBIO4 
ID4841107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp908007 
End bp908700 
Gene Length694 bp 
Protein Length217 aa 
Translation table12 
GC content46% 
IMG OID640392422 
Productdethiobiotin synthetase 
Protein accessionXP_001386590 
Protein GI150866857 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTT TACGTATATT CGTAGCTGGA ACTGATACCG ATGTGGGCAA GACCTTCGTG 
TCGTCGATAT TGGCCAAACG ATGGGGTTGC AATTACTGGA AACCGATCCA AACTGGCTTG
GAGTCGGAGG AAGGTGACCT TATGACCGTG AAACGGTTGA CCAAGCTCAA AAGCGACCAC
TTCGCCTCAC CACTGGTCCT GCTAAGAAAG CCATTATCTC CCTGGGTAGC GGCAATGCAT
GAAAATAAGG AAATTAGGGT GTCGGATTTC ACAATTCCTA AGCGGTTCCA ACAGAGTGAA
CGATGCTTGT TAGTAGAAGG AGCTGGGGGG TTGTATGTGC CGATCAACCG TAATGAGATA
ATGACCGATC TCATTACTCA ATTGAACTGC AAGACTCTTT TGGTATGTAG GAGTGAGCTA
GGAACCATAA ACCATACCTT GCTCAGTATC GAACACTTGA GAGCGCGGGG CATAGAAATT
ATGGCCCTAA TCATGAATGG CATTCCCAAT GACGACAACG CCAAAGCCAT CCATACTCTC
AGTGGTGGAG TCCCCATCCT CTGTCAGATT CCACCTTCGA CAAGCATCGA TGATTTGACT
CTGTTAGTTC CCGATTTAGA ATCGTTAGTG GGCGCAAATA GCCAATCTCC ATAGACTATG
TATATAGCGA TAAAATATAT TCAAGCATAT GTTT
 
Protein sequence
MKGLRIFVAG TDTDVGKTFV SSILAKRWGC NYWKPIQTGL ESEEGDLMTV KRLTKLKSDH 
FASPSVSLRK PLSPWVAAMH ENKEIRVSDF TIPKRFQQSE RCLLVEGAGG LYVPINRNEI
MTDLITQLNC KTLLVCRSEL GTINHTLLSI EHLRARGIEI MALIMNGIPN DDNAKAIHTL
SGGVPILCQI PPSTSIDDLT SLVPDLESLV GANSQSP