| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85553 |
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| Symbol | MDR112 |
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| ID | 4841086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 812100 |
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| End bp | 814457 |
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| Gene Length | 2358 bp |
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| Protein Length | 601 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392401 |
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| Product | Putative transporter |
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| Protein accession | XP_001386568 |
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| Protein GI | 150866839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTCAGATTTC CTTCTAGTAT TGCTAGAATC ATCTCAGACC TCAGTTTTGA GTTACACCAC
CGTATCGTGC TGTGTTCTTT TCTTGGTGCT CAGCCGTGTC TAAGTCGTAT ACCTTGGAAA
AGTGTCCGCT ATTCCGAGGA AGATTATCAA TTGACTGAAC CCAAAGTCAG TAGAAAACCA
CCACTCAGAG TTCAACCTAA TCGACTTGTA ACTCTGTTTG ACGAAACTGA ATTCGAAATT
TCATTCGAAT CAACAATCCA AAACCACCTA CGCTTCAATT GTCGTTCCAC TTACTGTTTA
TAGTTCCAGT CTCGAAATTT TTTTCAGACT TTCCTAATTT TGCATAATTC CGTAAATTTC
AATTTTCCAA TGTCGTCCAT AGAAAAGAAA GAACAGAGGG CCAATCTCAA CGAAAGTGCC
CATTCTGATA CCCTCCAAGA ATCTAATTCT TCTCAGATTG ATGATGCCAG AGACCTTGAG
GCTGCAGCCA AGGGTCTGAA CCATGACTAT GACTCATCGT CTGATGCACC AACTGGCCCA
GAAGCCTTTG TTGGTGGTGA TTTGGAGTCT GCTAACTTGG AAGAAGATGC TATCCCTTTT
GGTGGCGATG AACTTTCTCG TTACGAATCA AACACCCAGG CTTCTAGAAC TTTGAGTAGA
AGATTGACCA ATGCCGACGC CTTGATTGAA GAAGCCAACA ATACCGACGA GCCTTTGCCT
AAAATGGGTA ACGACCGTCC CTACCCTCCA GCATTGCCAG ACAGAGCTCC GTATATAGTT
GCTTTTGATG GTGCTAACGA TCCTATTCAT CCTCATAACT TCTCCTTAGT CAGAAAAATC
GCTTATTGTT GTGCTGTGGG TATGGCTGCT TTGTCTGTTT CGATGGGTTC AGCTTTGTTC
GCCGAAAGTT CTGAAGATAT AGTTGTATTA TTCCATGTTG GCACCACTGT TGCTACATTG
GGTACTTCTT TGTTTGTGAT GGGCTTCGCT AGTGGTCCTA TCTTCTTTGG TCCCTTGTCT
GAATTGTACG GAAGAAAGAT TGTGTTGGTT ATCTCTTCAT TTGGTTACGT CTGCTTCTCC
TTCGCTGTCG CTACAGCCAA GGATATCCAG ACCATTATGA TCTGTCGGTT CTTTGCCGGT
TTTATTGGTG CAGCTCCATT GGTTGTCTCC GCAGCAGTCA TGGCTGATTT GTTCTCTGCT
AAAACAAGAG GCAGTGCCAT TGCTGTATTT GCCATGGTAT TGTTTGGTGG TCCAATGTTG
GCTCCTATAA TCGGTGGTTT CACTGTCAAG AACCCTAACT TGGGCTGGAG ATGGACATCC
TACTTCTGTG GGATCATTGG TGCTCTCTCT TTCTTGTTAA ATACTTTCGT TTTAGAAGAA
ACCCATCATT CCATCATCTT AGTGAAGAAG GCTGAAACTT TAAGAAGAAG AACAGGTAAC
TGGGGAATTG TTGCTCCCCA TGAGGAAATT CAGTTGTCCA TCAAGGAAAT CGCCGAAAAG
AATATCACCA GACCGTTGGT CATGTTGTTT ACGGAGCCTA TCATTCTTCT CATCACCATC
TACAACGCCT TTATTTATGG TATGCTTTAC TTGTTCTTGA CGGCAATCCC CTTGATTTTC
ATTGGTAACT ATGGATTCTC TCAAGGTGTG GGTGAGTTGC CTTATATCTC CATGTTGATA
GGTATCTTTG TCGGAGGTAT CTTTATCATT TTCTTTGAAA AAAGATACAA CGCTGCCATG
GACAAAAACG GCGGAAAGCC TGTTCCAGAA GAAAGATTGC CTCCTATGAT GGTTGGATCC
TTCTTTTTCG CTGCTGGCTT GTTCTGGTTG GGCTGGGCTG GTAGCTACCC TGACAAGGTG
CATTGGATCG TTCCTACCAT TGGTGCTTCC TTCATTGGTT GTGGGTTGAT TATGATCTTT
TTGCCATGTC TTAACTACAT CATTGACTGT TACTTGTTCT TTGCTGCCTC TGCCTTAGCT
GGTAACACCT TCTTGAGATC AGCCTTTGGT GCTGTTTTCC CATTGTTTGC CAGACAAATG
TTTGTCAACA TGAAGATCCA GTGGGCTTCC ACCTTGTTGG GATGTGTGGC TATAGCCATG
ATTCCAGTGC CTTTCTTGTT TTACAAGTAT GGTAAGAAAA TCAGAGAGAA GTCTAAGTTT
GCCTTTGTAT TGTGAGCTTT CTATCTCCAT TCTTCACTGC ATGAACAGCG ACCTGTGAAC
CTGTTCGAAA CTCATACACA TGTTAATAAA TCCATTCCTA ATACACCTAC TAATAGTCGT
AATAGACGTA TATATATTAA AGATTAGTAG AAGAGTATAG ATATACATAT GAACAATCCA
GTACATGTAA TTTTGCCA
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| Protein sequence | MSSIEKKEQR ANLNESAHSD TLQESNSSQI DDARDLEAAA KGSNHDYDSS SDAPTGPEAF
VGGDLESANL EEDAIPFGGD ELSRYESNTQ ASRTLSRRLT NADALIEEAN NTDEPLPKMG
NDRPYPPALP DRAPYIVAFD GANDPIHPHN FSLVRKIAYC CAVGMAALSV SMGSALFAES
SEDIVVLFHV GTTVATLGTS LFVMGFASGP IFFGPLSELY GRKIVLVISS FGYVCFSFAV
ATAKDIQTIM ICRFFAGFIG AAPLVVSAAV MADLFSAKTR GSAIAVFAMV LFGGPMLAPI
IGGFTVKNPN LGWRWTSYFC GIIGALSFLL NTFVLEETHH SIILVKKAET LRRRTGNWGI
VAPHEEIQLS IKEIAEKNIT RPLVMLFTEP IILLITIYNA FIYGMLYLFL TAIPLIFIGN
YGFSQGVGEL PYISMLIGIF VGGIFIIFFE KRYNAAMDKN GGKPVPEERL PPMMVGSFFF
AAGLFWLGWA GSYPDKVHWI VPTIGASFIG CGLIMIFLPC LNYIIDCYLF FAASALAGNT
FLRSAFGAVF PLFARQMFVN MKIQWASTLL GCVAIAMIPV PFLFYKYGKK IREKSKFAFV
L
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