Gene PICST_85539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85539 
Symbol 
ID4841005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp488280 
End bp488950 
Gene Length671 bp 
Protein Length200 aa 
Translation table12 
GC content49% 
IMG OID640392320 
Productpredicted protein 
Protein accessionXP_001386485 
Protein GI126139926 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID[TIGR01755] NAD(P)H:quinone oxidoreductase, type IV 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.08977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACAAACACA AGTAATCACA ATGGCTCCAA AAGTTGCAAT TATCATCTAC TCCTTGTACC 
ACCACATCGC TACCATGGCT GAAGCAGTCA AGAAGGGTGT CGAAGCTGCT GGCGGTGAAG
CTACCATCTT CCAAGTGCCA GAAACCTTGT CCGAAGAGGT TTTGACTCTT TTGCACGCTC
CACCAAAGCC AGACTACCCA ATCGCCACCA ACGACACCTT GACCTCCTAC GATGCCTTCG
TCTTTGGTAT CCCTACCAGA TTCGGTAACT ACCCAGCCCA ATTCAAGGCC TTCTGGGACG
CTACTGGAGG TTTGTGGGCT TCTGGTGCTC TTTACGGTAA GCCTGCCGGT ATCTTCGTTT
CCACCGGTAC CCCAGGTGGA GGTCAAGAAG TCACTGCCTT GAACGCTCTT TCCGTGTTGG
TTCACCACGG TATCATCTAC GTTCCTTTGG GTTACGCTAA GGCTTTCCCA CAGATCACCT
CTTTCGAAGA GGTTCACGGT TCTTCGCCAT GGGGTGCCGG TACCTTTGCT GGTGCTGACG
GTTCCAGATC GCCAAACAAG ATCGAATTGG AAATCGCCGA GATCCAGGGT AAGAGCTTCT
ACGAAACCAT CCAAAAGTTC TAGATGTTCT GAATGTATAC GAGTATAATT GAATAAATGT
AAGCGAATGA T
 
Protein sequence
MAPKVAIIIY SLYHHIATMA EAVKKGVEAA GGEATIFQVP ETLSEEVLTL LHAPPKPDYP 
IATNDTLTSY DAFVFGIPTR FGNYPAQFKA FWDATGGLWA SGALYGKPAG IFVSTGTPGG
GQEVTALNAL SVLVHHGIIY VPLGYAKAFP QITSFEEVHG SSPWGAGTFA GADGSRSPNK
IELEIAEIQG KSFYETIQKF