Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85539 |
Symbol | |
ID | 4841005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 488280 |
End bp | 488950 |
Gene Length | 671 bp |
Protein Length | 200 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640392320 |
Product | predicted protein |
Protein accession | XP_001386485 |
Protein GI | 126139926 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.08977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CACAAACACA AGTAATCACA ATGGCTCCAA AAGTTGCAAT TATCATCTAC TCCTTGTACC ACCACATCGC TACCATGGCT GAAGCAGTCA AGAAGGGTGT CGAAGCTGCT GGCGGTGAAG CTACCATCTT CCAAGTGCCA GAAACCTTGT CCGAAGAGGT TTTGACTCTT TTGCACGCTC CACCAAAGCC AGACTACCCA ATCGCCACCA ACGACACCTT GACCTCCTAC GATGCCTTCG TCTTTGGTAT CCCTACCAGA TTCGGTAACT ACCCAGCCCA ATTCAAGGCC TTCTGGGACG CTACTGGAGG TTTGTGGGCT TCTGGTGCTC TTTACGGTAA GCCTGCCGGT ATCTTCGTTT CCACCGGTAC CCCAGGTGGA GGTCAAGAAG TCACTGCCTT GAACGCTCTT TCCGTGTTGG TTCACCACGG TATCATCTAC GTTCCTTTGG GTTACGCTAA GGCTTTCCCA CAGATCACCT CTTTCGAAGA GGTTCACGGT TCTTCGCCAT GGGGTGCCGG TACCTTTGCT GGTGCTGACG GTTCCAGATC GCCAAACAAG ATCGAATTGG AAATCGCCGA GATCCAGGGT AAGAGCTTCT ACGAAACCAT CCAAAAGTTC TAGATGTTCT GAATGTATAC GAGTATAATT GAATAAATGT AAGCGAATGA T
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Protein sequence | MAPKVAIIIY SLYHHIATMA EAVKKGVEAA GGEATIFQVP ETLSEEVLTL LHAPPKPDYP IATNDTLTSY DAFVFGIPTR FGNYPAQFKA FWDATGGLWA SGALYGKPAG IFVSTGTPGG GQEVTALNAL SVLVHHGIIY VPLGYAKAFP QITSFEEVHG SSPWGAGTFA GADGSRSPNK IELEIAEIQG KSFYETIQKF
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