| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85501 |
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| Symbol | SNF3 |
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| ID | 4841041 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 102495 |
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| End bp | 104867 |
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| Gene Length | 2373 bp |
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| Protein Length | 747 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640392356 |
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| Product | High-affinity glucose transporter |
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| Protein accession | XP_001386416 |
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| Protein GI | 150866728 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0464607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.964846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAAT TTCTAGAAGC TCTACTTTAC GACAACACCA TCGAAGAAGA ATACTACAGG
AAAATCCGTC AAAAGTCCTC CTCCAAGTCG GCTGTAATCG TAGGTCTTGT AGCTGCCGTG
GGAGGCTTTT TGTATGGGTA CGATACGGGA CTCATCAACG ACTTGCTAGA AATGAGATAC
GTCTACGAAA ACTTTCCAGA AAATCTGCAT TCGTTCACAT CACATGAACG AGCGTTGATT
ACGGCTGTGT TATCGCTCGG AACATTCATA GGAGCTCTCA TAGCGCCTCT TATCTCCGAC
AACTATGGCC GGAAGTTTTC CATCATTGTC TCTTCCGGTC TCATTTTCAA CGCAGGCAAC
ATTTTGCAAA TCGCATCAAC AAACGTAGCA TTGCTTTGCG TTGGTAGAGC GATCTCGGGT
GTATCTGTAG GCATTCTTTC GGCCATTGTA CCCTTGTACC AAGCTGAAGC TTCTCCCAAA
TGGGTCAGAG GTTCCGTCGT TTTCACATAT CAATGGGCCA TTACTTGGGG CTTGTTGATA
GCGAGTGCCG TCTGTCAAGG CACTCGAAAA ATGACCAATT CTGGCTCATA TCGGATCCCC
GTGGGCCTCC AGTTTCTCTG GGCTCTTATC TTGTACACGG GGATGCTTTT CTTGCCCGAA
AGTCCCCGTT ATTATGTTCA AAAAGACGAT CTTCAGAAAG CTCTAGATAG TTTGTCGAAG
TTGCGAAAGT TGCCCCCAGA CGACGCTGAT TTGATAGAGG AGTTGGTGGA AATCAAGGCT
AACTACGACT ACGAGTTGTC GTATGGTAAG ACCAACTATC TTGATTGCTT CCGTAGTGGA
GGAGGAAGAC ACAAGCAGGT GTTGCGAATG TTCACTGGAA TCGGTGCTCA ACTCTTTCAG
CAGTGTTCAG GCATCAACTT CATCTTCTAC TATGGTGTCA ACTTCTTCTC CAGCACCGGC
ATCCAGAACT TTTACATCAT GTCCTTCGTG ACGTATTTGG TCAACACTAT CTTCACAATC
CCCGGAATAA TTCTAGTGGA TACGATAGGC AGGCGACAGT TGCTCCTATG GGGTGGCGTA
GGCATGTCTA CCGCGAACTT CATAATTGCG ATTACGGGAG TCAGTATCTC CAGTAAGGAA
ACCAGTTCGA TTCTAAGCGT CTGTTTTTCG TGTGTGTTCA TAGCGTTTTT CGCCAGTTCG
TGGGGTGGAT GTGTATGGGC ACTCACTTCT GATATATACG GTATTAGTAT CAGACAGAGA
GCCATATCCA TCACTACAGC CACGAACTGG TTGGTCAACT TCATCTTTGC CTACATAACA
CCGTATCTCA TCGATACGGG ACACCATACT GCAGCTATAG GAAACAAAAT CTTCTTTATC
TGGGGAGGTT GTAACGCTGC CGGTGTCGTT TTCGTCTACT TCACTGTCTA CGAAACAAAG
GGATTGAAGT TGGAGGAAAT TGATTATATG TACGCTCATT GTGACAATGC GAGAAAGTCC
ACCGAGTTCA AGTCGACCAA AATCGATTAC ACTAGATTGG ACGAGAACTA CAACGCTGTA
CCCTGGGATC CTCCTTATCC ATCAACAACG AGCTCATCGC CTCCTTCTAA CATCAACGAG
AAGGACCTTT CATCTTCTGA TCCCAACCAA GACGTCAATG TACATAGTGA CAACAACGAG
TTTGTTCCAT TGTACAACAA CAAAAAACTT CCAAATAATC CTACAAACAC CAACAAAAAC
GACATCACCA TCATTCCCTA CAACAATATC ATTCTGCCGT CGTTATCATC GAACTCCGAG
CCCTCTTCTG CTGCTTCGTC AATTCTCAAC AACAGATTCC ACCACAACTC TGTCTCGACT
ACAAACAACG TCTCTGTATC TACATCTAAC CCTGGCCAAT CTTCTGGTCA AGGTACAGCT
TCCAACGACT ACTTGCTGTA TTTGGATAGT TTGAAGTCTG AGTACGGAAG TCCACCTCAC
TACAATAACG ACACACTACA CCAGCAGCAC ACCAACCAAT CGAACTCCAA GGGTTCTGTA
GGCAATACGG GATCGATGCT GAACACATCC AAAATCTTCA CGGAACGTGA TTTAAAGAGT
ATTACGGACG AGTACGATCT TATCATGAGA AGTGGCAGCG GAAATACTAA CGGTCATGAA
AATCAGGCTA CAGACAGAAA CAGCAGCATC ACTGCTAGCA ACATTCACCA TACTCATAGC
AACATCACCA GCAACATTAA TAACCATAAT AGTAATAACA TTAATAACAG TATAACCAAC
AATTCGACCA CGATTATTGC CACGCCATAC TTCAACCAGC CTCCACCAGA CTCTTCCGAT
GAAGAAGACG AAGACGAGGA CGAAGAAGAA TAG
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| Protein sequence | MWKFLEALLY DNTIEEEYYR KIRQKSSSKS AVIVGLVAAV GGFLYGYDTG LINDLLEMRY
VYENFPENSH SFTSHERALI TAVLSLGTFI GALIAPLISD NYGRKFSIIV SSGLIFNAGN
ILQIASTNVA LLCVGRAISG VSVGILSAIV PLYQAEASPK WVRGSVVFTY QWAITWGLLI
ASAVCQGTRK MTNSGSYRIP VGLQFLWALI LYTGMLFLPE SPRYYVQKDD LQKALDSLSK
LRKLPPDDAD LIEELVEIKA NYDYELSYGK TNYLDCFRSG GGRHKQVLRM FTGIGAQLFQ
QCSGINFIFY YGVNFFSSTG IQNFYIMSFV TYLVNTIFTI PGIILVDTIG RRQLLLWGGV
GMSTANFIIA ITGVSISSKE TSSILSVCFS CVFIAFFASS WGGCVWALTS DIYGISIRQR
AISITTATNW LVNFIFAYIT PYLIDTGHHT AAIGNKIFFI WGGCNAAGVV FVYFTVYETK
GLKLEEIDYM YAHCDNARKS TEFKSTKIDY TRLDENYNAV PWDPPYPSTT SSSPPSNINE
KDLSSSDPNQ DVNVHSDNNE FVPLYNNKKL PNNPTNTNKN DITIIPYNNI ISPSLSSNSE
PSSAASSILN NRFHHNSVST TNNVSVSTSN PGQSSGQGTA SNDYLSYLDS LKSEYGSPPH
YNNDTLHQQH TNQSNSKGSA TDRNSSITAS NIHHTHSNIT SNINNHNSNN INNSITNNST
TIIATPYFNQ PPPDSSDEED EDEDEEE
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