Gene PICST_85453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85453 
SymbolHXK1 
ID4840806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp502376 
End bp503909 
Gene Length1534 bp 
Protein Length482 aa 
Translation table12 
GC content46% 
IMG OID640392121 
ProductHexokinase 
Protein accessionXP_001386689 
Protein GI150866927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5026] Hexokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.148863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCACT TAGGTCCTAA GCCTCCTCAG CATAGAAAGG GTTCGTTGCA CGATGTTCCC 
GAAGCGCTTC TCAAAGAATT GGAGCAGCTT GAGTCTGTTT TCAATGTTAG CGCAGAAACT
CTTCGCAAGA TCACCGACCA CTTTGTCCTC GAATTAGAGA AGGGTTTGAG CAAGAAAGGC
GGCAACATTC CCATGATACC CGGCTGGGTT CTTGACTTTC CAACCGGGAA AGAAACGGGT
GATTACCTTG CCATAGATTT GGGAGGAACC AACTTGCGAG TTGTTTTGGT CAAGCTTGGA
GGAAACAGAG ATTTCGACAC CACTCAGTCC AAGTACCCAT TGCCAGCTAC CATGAGAACA
GCAAAGAGCG AGGAGTTGTG GGACTTCATC GCTGGTTGTT TGAAGAAGTT TGTGGAAGAC
GAATACCCAG AGGGAGTGAC TGAGCCATTG CCATTGGGTT TCACTTTCTC GTACCCAGCA
TCGCAGAGTT CTATCAACGA AGGTTTCTTG CAAAGATGGA CCAAGGGTTT TGACATTGAC
GGAGTTGAAG GTCGCGATGT CGTTCCAATG TTGCAAGAAG CTATCAAGAA GGAAAACGTT
CCTATTGAAG TTGTAGCCTT GATCAACGAT ACCACCGGTA CTTTAGTTGC TTCCGCCTAT
ACCGACCCTG AGACCAAAAT GGGTTTGATT TTCGGTACAG GCTGTAACGG TGCTTATTAC
GATGTCTGTG GCGAGATTCC CAAGTTGGAG GGCCAGTTCC ACGGCGATGT AGCTGGAGAA
TCGTTGATGG CTATCAACTG TGAATACGGA GCTTTCGACA ATGAACTCGC AGTTTTGCCC
AGATCCAAGT TTGACCACCA GATCGACGCT GAATCACCTA GACCAGGCCA GCAGGCTTTT
GAAAAAATGA TTTCTGGCTA CTACTTGGGT GAGGTGTTGA GACTTGCCTT ATTGGACTTG
CTGGCTAAGG GAATATTTTT CAAAGACCAG GACTTGTCCA AGTTGAACCA GCCTTTCATT
TTGGACACTT CTTTTCCAGC CAGAATTGAA GAAGACCCTT ACGAAAACTT GTCAGACGTC
CAAGACTTGT TCCAGCAAGA GTTGGGTATC CAGACAACCG ATGCTGAAAG AAGTGTTATT
CGCCGTTTAG CAGAAGTAAT TGGAGAAAGA TCGGCTAGAT TGTCAGTATG TGGTATTGCT
GCTATCTGTA AGAAGAGAGG CTACAAGACC GCCCACGCTG CCGCTGACGG TTCTGTCTTC
AACAAGTACC CTGGCTTCAA GGAAAGAGCT GCTAAGGGAT TGAGAGACAT CTTCCAATGG
GAGACCAAGG AGGATCCAAT CATCATTGTT CCAGCCGAAG ATGGTTCTGG AGTAGGTGCT
GCTGTCATTG CAGCCTTGAC CGAAAAGAGA TTGAGAGAGG GTAAGTCCGT AGGAGCAAAG
AAGAACTAAA AATTCATTCT CTAAGTCAAA TGTCCATGTA CGAATACTAT ACTATAGCTA
GAATAACTAA TAACACAGGT AATGGCTAAT TTGT
 
Protein sequence
MVHLGPKPPQ HRKGSLHDVP EALLKELEQL ESVFNVSAET LRKITDHFVL ELEKGLSKKG 
GNIPMIPGWV LDFPTGKETG DYLAIDLGGT NLRVVLVKLG GNRDFDTTQS KYPLPATMRT
AKSEELWDFI AGCLKKFVED EYPEGVTEPL PLGFTFSYPA SQSSINEGFL QRWTKGFDID
GVEGRDVVPM LQEAIKKENV PIEVVALIND TTGTLVASAY TDPETKMGLI FGTGCNGAYY
DVCGEIPKLE GQFHGDVAGE SLMAINCEYG AFDNELAVLP RSKFDHQIDA ESPRPGQQAF
EKMISGYYLG EVLRLALLDL SAKGIFFKDQ DLSKLNQPFI LDTSFPARIE EDPYENLSDV
QDLFQQELGI QTTDAERSVI RRLAEVIGER SARLSVCGIA AICKKRGYKT AHAAADGSVF
NKYPGFKERA AKGLRDIFQW ETKEDPIIIV PAEDGSGVGA AVIAALTEKR LREGKSVGAK
KN