Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_80013 |
Symbol | MIS1 |
ID | 4840824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 59728 |
End bp | 63948 |
Gene Length | 4221 bp |
Protein Length | 995 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392139 |
Product | mitochondrial C1- tetrahydrofolate synthase precursor |
Protein accession | XP_001386613 |
Protein GI | 150866874 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.959666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATTTCCGTTC TTGCTGAGAC TTCTAATCTG AACTACGTTA GCTTCAACTC CAGCGCCGTA TCCGCTATTG CTAACATTCG TTCCCTTTGG ACCCTTATAG ACTCGATTTT TCAGATTTTG CATCTAGCAA CTTGACCATA TAGCAACTTC ATAGACTTAT ACACATCTGG AAAATGTTGT CGAAACACAT TTCCAAGCAA CTCATAAAAC CTGTCAGAGT GTCAAGACTC TCTGCAAGGA CTTTTTCACT TTCTTCCCGC AATCTTGATG CTGTCGTACT TTCAGGAACG AAGTTGGCTA AAACCATCAG AAATAATATC GCTGAAAAGG TTATCCACTA CAACCAGGCC CACTACGACG AGTTTGCCAA TATCGACACC ATCGACTTCA CGGCACTTAA GTTCCGTCCA AACTTGACCA TTATCCAAGT TGGTTCCAGA CCAGACTCGT CTGCTTATGT CCGTTCCAAG TTGAAGGCTG CTCAGCTGTC CAATATTCAG TCAACACTTG TCAAACTTGA TGAAGACATT TCCCAAGAAG ACTTGTTGGA AGAAATTGAC CGTTTGAACA AGAACCCCAA GGTAAACGGT TTGTTGATCC AGTTGCCATT GCCAAAGCAC ATCGACGAGA CGTTAGTAAC AAACTCGGTT GCTACCGAAA AAGATGTGGA TGGTTTCGAT CGTTACAACG TGGGAGAGCT CTCCAAACGT GGTGGTTCTC CATTATTCCT CCCTTGTACA CCTAGTGGAA TTATAGAGCT CATAAAGACT ACTGGTGTCA CTTTACGTGG TAAGAATGCT GTTGTTATCG GGCGTTCTGA TATCGTAGGT ACACCTGTTG CTGCCTTGTT GAAGAACGAA GACTGTACCG TCACCACTTG TCATCGTTAC ACCAAGGACT TGCCTGAAGT AGTGTCTAGA GCAGATATTG TTGTGGCTGC TGTCGGCATT CCTGAATATG TCAAAGCCGA ATGGATCAAA TCTGATGCCA TTGTCATTGA CGTTGGTATC AATTATAAGG AAGATTCTAC AGCAAAGAAC GGCCAGAAGC TCGTAGGAGA TGTCGACTAC CAGTCAGTTG CTAAAAAGGC TGGCTTCATT ACCCCTGTCC CCGGTGGAGT TGGCCCCATG ACTGTAGCCA TGTTGTGTTC CAACGTATTT GATGCAGCAG TTTTGCAGGC AAAGAAGGCA CACGAACACG CCTTTCAACC TTTGCCATTG CAGTTGAAGA CTCCCGTGCC TTCTGATATT GCCATTTCGC GTGCCCAGAA GCCTAAGAAG ATTACCAAAA TTGCTCAAGA ATTGGGTATT CTTGAAAAGG AACTCGAACC CTATGGCCAC TTCAAAGCCA AAGTGGATCC CAGATCGGTT GTAGAAAGAT TAGATGAACA AGTCGAAGGC TCCACCAATG AAAAGGGCCA CTACGTCTTG GTTGCTGGGA TTACTCCTAC TCCATTAGGT GAGGGTAAGT CCACTACTAC CATGGGGTTG ACTCAAGCCT TGGGTGCTCA TTTGGGATAC AACTCGATTG CCAATGTGAG ACAGCCATCC ATGGGTCCAA CCTTTGGTGT GAAAGGTGGT GCTGCTGGTG GTGGTTACTC TCAGGTTATT CCTATGGACG AGTTCAACAT GCACTTAACT GGTGATATCC ACGCTATCTC TGCTGCTCAG AACTTGCTTT GTGCTGCTGT AGATACCAGA ATGTTCCACG AAGCCACATC AAAGACCATC AAGGGTTTCT ACAAGAGATT GGTGCCAGCC AAGAAGGGAG AAAGAAAGTT CACTCCTTCT ATGTTGAAGC GCTTACAGAG CCTTGGAATC ACAAAGACGA ACCCTGATGA ATTGACTGAT TCTGAAATCG AGAAGTTTGC CCATTTGAAC ATAGACCCAG CTTCTATTAC TATCAAGAGA GTTGTAGACT GCAACGACAG ATTCGTTCGT GAAATAACTA TCGGTGAAGG CAAGAACGAA GCTAGCAAGT TCCCACCCAG AAAGTCTGGA ATGGATATAA CTGTAGCTTC TGAGTTGATG GCCATTTTAG CATTGTCGAC TTCATTGAAA GACTTGAGAC AAAGAGTCGG TAAAGTCGTT GTTGGAACCC AAAAAGAGAC TGGTATTGCT ATCACTGCTG AAGATATTGG CTGTGCTGGT GCTATCACTG CCTTGCTTAA GGATGCAATT AAGCCTAACT TGATGCAGAC TTTGGAAGGA ACTCCTGTAT TCGTCCATGC TGGTCCTTTT GCCAATATTT CCATTGGTGC ATCTTCCGTG ATTGCTGACC AGTTAGCATT GAAGTTGACT TCGCCCTCCA ACCCCATCAA TAACGGTAAC AAAGGATTTG TCGTTACTGA GGCTGGTTTC GACTTCACAA TGGGTGGAGA GCGTTTCTTC AACATCAAGT GTAGAGCCTC TGGCTTCAAG CCAGATACCG TAGTGTTAGT TGCTACATCA AGAGCCTTGA AATTGCATGG AGGAGCTCCA GACGTAAAAC CAGGGCAACC TTTGCCTACT GAGTATGTCA CCGAGAACAT CGACTACTTG GTCAAGGGTT GTGCTAACTT GGCAAAACAG ATTTCTAACA TTAAGCAGTA CAATGTTCCT GTTGTTGTAG CCATCAATAA GTTTGAAACC GATACTGATG CTGAAATTGC TGTCATCCAA GAACAAGCTG TCAAGGCTGG TGCCGAGTTC GCCGTTCCTT CTAATCACTG GGCTGAAGGT GGTGCTGGTG CGCTTGACTT GGCCAAATCT GTTGTAGAAG CTGTCAAACT TTCGGACAAG AGTGCCAAAC AAACTTACCT CTACGACGTT AACTCGACTG TGGAAGAAAA GATCTTGACC ATTGCTTCCA AAATGTACGG AGCTTCTGCT ATTGAGTTGT CTCCATTGGC CAAGCAACAG ATAGCTACTT ATACTCAACA AGGCTACGAT AAAATGCCTA TTTGTATTGC CAAGACCCAA TACTCGTTGT CTCATGACCC AGCCTTGAAG GGTGTTCCTA CCGGCTTCAC TGTTCCTATC AGAGAAGTCA GATGTTCAGC CGGTGCCGGA TACTTGTATG CTCTTGCTGC TGAGATCATG ACTATCCCAG GTTTGCCTAC CCACGCTGGT TTCATGAATG TCGAAGTCAA TGATGATGGC GAGATCGAAG GTCTCTTCTA ACGAAACGTC TTTGATAGAC ACCAAAATTA TGTACATTAC TCTATGCTTA TAAAGCTATG CATTATATAT TCTTAATCGT ATACAAAAAG GATGATCTAG CAAGTGTAGA TTTAGCAAAT GCTTGGTTTA ACTAGAAGTG AATGTTCAAC TGGCACTGAT GGTAACACTA AGCTTAAACT TCTGCTACTT TCTACTACTT GAAAGTTTCA GGATCTGTGA TATCGGAGTC ACCATTATTG AAATCATAGC CTCTGCCGAA GGTCACCTTG TTGTCAATGA TCTCAAAGAT CACCCTGGCC ACATCTGCTC TGGTAACTGA GCCACTTTCG TCCCCTTCTG AAAGTACTTT GATCTTACCT TGAGGTGGAT CGTCCTTCAA CAAGCTAGGC CTCAATATAG TGTAGTCCAA CTCGTCCTTG AATTCAGCTT CAAGGATTCG ATCTGCATAA TGTTTGGCAA TGTAGTAGTT TCTGATCGGA GATTTCTCGA AGAATTCTCT TGAATCCGCA TAGATGGCAC TGACAATGAT GAAACGTCTC ACTTCAGCAA TCACCAGAGC TTCAAATGTC TTGACTGCAC CATCCAAGTC TACCTGGAGC AAGTTCTTGC CACCAGAACC GGCTGTAAAC ACCACAGCAT CATGACCTAC AATAACTTCA ACCAAATCAC CTATAGAAGC CGAATCCACA GTGAAAAGCT TCGTAGAAAT ATTCGATGAT TTCTGGGCAA TTTCTTGAAT ATGATTAGCC TGCTCTTGGT TTCTCACTAC CGCAGTGGCC CTGTAAGGCG ACGAACTGGA AGCAATGAGC TTGACCAATT GTTGACCCAC CTTTCCGTGT GCTCCAAAGA TAACGATACG AGACATCAGG TACTTAATAA TTGAGAAAGT AATATAGTGT TGTAGATTTA CTTAACAAGA ACAGGTTCGA ACTATTATTG ATGTTTTTGA ATTTGAAGAT TTATAGTAAT CGTAAAACTG TTATAAATCG GCACAGTTCA ATATAATGTG TGTGTCTGAA TTTAATTTAA CAACCAATTC TAGATTTACT AAGCAAAATG T
|
Protein sequence | MLSKHISKQL IKPVRVSRLS ARTFSLSSRN LDAVVLSGTK LAKTIRNNIA EKVIHYNQAH YDEFANIDTI DFTALKFRPN LTIIQVGSRP DSSAYVRSKL KAAQSSNIQS TLVKLDEDIS QEDLLEEIDR LNKNPKVNGL LIQLPLPKHI DETLVTNSVA TEKDVDGFDR YNVGELSKRG GSPLFLPCTP SGIIELIKTT GVTLRGKNAV VIGRSDIVGT PVAALLKNED CTVTTCHRYT KDLPEVVSRA DIVVAAVGIP EYVKAEWIKS DAIVIDVGIN YKEDSTAKNG QKLVGDVDYQ SVAKKAGFIT PVPGGVGPMT VAMLCSNVFD AAVLQAKKAH EHAFQPLPLQ LKTPVPSDIA ISRAQKPKKI TKIAQELGIL EKELEPYGHF KAKVDPRSVV ERLDEQVEGS TNEKGHYVLV AGITPTPLGE GKSTTTMGLT QALGAHLGYN SIANVRQPSM GPTFGVKGGA AGGGYSQVIP MDEFNMHLTG DIHAISAAQN LLCAAVDTRM FHEATSKTIK GFYKRLVPAK KGERKFTPSM LKRLQSLGIT KTNPDELTDS EIEKFAHLNI DPASITIKRV VDCNDRFVRE ITIGEGKNEA SKFPPRKSGM DITVASELMA ILALSTSLKD LRQRVGKVVV GTQKETGIAI TAEDIGCAGA ITALLKDAIK PNLMQTLEGT PVFVHAGPFA NISIGASSVI ADQLALKLTS PSNPINNGNK GFVVTEAGFD FTMGGERFFN IKCRASGFKP DTVVLVATSR ALKLHGGAPD VKPGQPLPTE YVTENIDYLV KGCANLAKQI SNIKQYNVPV VVAINKFETD TDAEIAVIQE QAVKAGAEFA VPSNHWAEGG AGALDLAKSV VEAVKLSDKS AKQTYLYDVN STVEEKILTI ASKMYGASAI ELSPLAKQQI ATYTQQGYDK MPICIAKTQY SLSHDPALKG VPTGFTVPIR EVRCSAGAGY LYALAAEIMT IPGLPTHAGF MNVEVNDDGE IEGLF
|
| |