| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74268 |
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| Symbol | APL2 |
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| ID | 4840988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 219710 |
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| End bp | 221977 |
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| Gene Length | 2268 bp |
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| Protein Length | 736 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392303 |
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| Product | beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex |
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| Protein accession | XP_001386441 |
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| Protein GI | 150866746 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5096] Vesicle coat complex, various subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGATGTCGCT TGAAAGGAAG ATTCGCAGCT TCTTGACGGG CCCCAGAAAG GGCGAGACGT
TTGAATTGAA GAGCGGTTTG GTTTCGCAGT ACAAGCACGA AAGAAAGGAT GCGATCCAGC
GAGTGATCCA GGCCATGACT GTGGGTAAGG ATGTGTCTTC GCTCTTTCCC GATGTCTTGA
AGAACATCGC CACCTATGAT TTAGAACAGA AGAAGTTGGT CTATTTATAC TTGATGAACT
ACGCCAAAAC ACATCCCGAG CTTTGTATTT TGGCTGTCAA CACTTTTGTG CAAGATACTG
AAGATCCCAA TCCCTTGGTG AGAGCCCTAG CCATCCGTAC TATGGGCTGT ATACGTGTCA
ACAAGATGGT GGACTATATG GAGATTCCAT TGCAGAGAAC GCTTCAAGAC GAGAATCCCT
ATGTGAGAAA GACCGCTGCT CTCTGTGTTG CCAAATTGTT TGACTTGAAT CCCGAAATGT
GTGTAGAGTT TGGCTTCTTG GACCAGTTGA AGGGTCTCAT CAAGGACTCC AACCCTATGG
TGGTGGCCAA TTCGTTGAAC GCTTTATACG AAATCAGAGA CATGAACTCC GATGCCAACT
TAGAGATTTT CACGGCTGAT ACCGAAACTG TCAAGAACTT ACTTATGTGC TTGAACGAAT
GCACTGAATG GGGAAGAATC ACCATATTGA CCACTTTGAA TGAATATCAT ACTGATGATG
CTGAAGAAGC CAACCACATA ATAGAGCGTG TGACTCCACA ATTGCAGCAT GTAAATCCGT
CTGTGGTGTT GAGTTCCATC AGAGCCATAA TCCACCATAT AGATGCTATA CCCGTCACAG
CGCAGAGAGC TGCTATCTTA AAGAAACTTT CTGCTCCATT GGTTTCGTTG GTTAGTTCTT
CGATTCCTGA AGCTCAATAT GTAGGCTTGA AGAATATCCG CATCATCTTG GAAAAGTATC
CTCAGATCTT GTCCAAAGAG TTGAGAGTGT TTTTCATCAA GTACTCCGAT CCCTTGTACT
TAAAGTTGGA GAAGTTGGAA ATCATGGTCC GTTTGGCTAA CGATTCTAAC AGCGCCTTGT
TGTTAGGTGA GTTAAAAGAG TATGCCATGG AATTCGAGCC TTCGTTGGTG GCTAAGGCTA
TCAAATCCAT TGGCTCTGTT GCCATCAAAT TGTCTGGCTC TACTGTCAAA GCAATCAATC
TTTTGAATAG CTTGATAGAC CATAGAGGGG GTGATTTAGT CATCAACGAG TCCATCGTCG
TTTTGACAAA TATATTGAGA CGTTACCCTG GTAAAAACGA TCTTATCACT TTAATTATCC
CAGTTATATC AAACCATATT TCCGAATTGG AGAGACTGGA TGCCATGTCC GGTTACATCT
GGCTCTTGGG AGAGTATCCC AAGTATTTCT CCAACTTGCA TGACAAATTA CAAGTCTTGA
TCGACGATTT CTTGTCGTTT GAGTCTGTAT TGCAGTTGAA TATCTTGACT GCTATTGTCA
AGATTAATCT CTCTGCTTCA GGCTCTAAGT ACTCCAGTTT GTTACAGAAG GTGTTGGAGT
CGTCCACCAA AGATTGTGAA AATGCTGATG TCAGGGACAA GGCATATATC TACTGGCGTT
TATTGTCGTC TTCATCTACC GAATCACAGA AGGAAATTAT CTTGACCAAG TTGCCTCCTA
TCACCACAAC CATTGCTTCT TTCAACCCTG TAGTTTTGGA GTCGTTGGTG GAAGAGTTGT
CGACATTGTC GTCTGTCTAC CATAAGCCTG CATTCACCTT CATTGATCCA AACGCTGCCC
ACAGTCATGT AGCTCAAGGT AACAAGTCCA GATCGTCTTC TAAGAAGGAC AACATTGAAG
ACTTGACCAA CTTGGCCAAA CAGGAAATTA TCAATAACGC TAAGAACGAA AACTTGCTTG
ACTTTGACGA TGACGATGAC GCACTTACAG GCGACAATGG TGCCGCTGAA GGTTCTGGCA
GTTTATTGGA TGAATTAAAC GACTTGTTCA GTGCACCTGT TCCCGTATCT CAGGGACAGC
AGACGCAGCC TTCTTCTAAT AACGATATAT TGAGTTTGTT TGGTGCAATC CCACAAAATG
CCCCAACTCC TGTGAGCAAT GTGACCCAGG GATTAAATAA CTTCAACATC GGATCCAATG
CTGCTCCAAG CAATACCAGC AAGTTGAATA ACGATCTCTT GGATCTTATG TAACGTTTAT
TTTGTATATG TTATAGATGT TATACAAAAT ACGGAATGTA ATGTACTC
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| Protein sequence | MSLERKIRSF LTGPRKGETF ELKSGLVSQY KHERKDAIQR VIQAMTVGKD VSSLFPDVLK
NIATYDLEQK KLVYLYLMNY AKTHPELCIL AVNTFVQDTE DPNPLVRALA IRTMGCIRVN
KMVDYMEIPL QRTLQDENPY VRKTAALCVA KLFDLNPEMC VEFGFLDQLK GLIKDSNPMV
VANSLNALYE IRDMNSDANL EIFTADTETV KNLLMCLNEC TEWGRITILT TLNEYHTDDA
EEANHIIERV TPQLQHVNPS VVLSSIRAII HHIDAIPVTA QRAAILKKLS APLVSLVSSS
IPEAQYVGLK NIRIILEKYP QILSKELRVF FIKYSDPLYL KLEKLEIMVR LANDSNSALL
LGELKEYAME FEPSLVAKAI KSIGSVAIKL SGSTVKAINL LNSLIDHRGG DLVINESIVV
LTNILRRYPG KNDLITLIIP VISNHISELE RSDAMSGYIW LLGEYPKYFS NLHDKLQVLI
DDFLSFESVL QLNILTAIVK INLSASGSKY SSLLQKVLES STKDCENADV RDKAYIYWRL
LSSSSTESQK EIILTKLPPI TTTIASFNPV VLESLVEELS TLSSVYHKPA FTFIDPNAAH
SHVAQGNKSR SSSKKDNIED LTNLAKQEII NNAKNENLLD FDDDDDALTG DNGAAEGSGS
LLDELNDLFS APVPVSQGQQ TQPSSNNDIL SLFGAIPQNA PTPVSNVTQG LNNFNIGSNA
APSNTSKLNN DLLDLM
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