| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74252 |
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| Symbol | UTP20 |
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| ID | 4841101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 275617 |
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| End bp | 283215 |
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| Gene Length | 7599 bp |
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| Protein Length | 2507 aa |
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| Translation table | 12 |
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| GC content | 36% |
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| IMG OID | 640392416 |
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| Product | U3 snoRNP protein |
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| Protein accession | XP_001386454 |
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| Protein GI | 150866754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.117257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA CGGCGAAAAC CAAGTCTACG GAGTCTTCAA GAAGACATGC GTTTTCTTCG
TTTCGTGAGA GAATTGATTC CATTAAGATT GAGCCCAACT TGAAACTTAC CAAACGGGTA
CATGATTATG TGGAAACTTC TCATTTTTTG GCTACACTCG ACCACTGGAA GGAGGTAAAC
TTAAGTGGAA ACTTCAGTGA ATTTGTTGAT AAGGTGGAAA TTTACTCACA GACTTTGCCG
CAGATCTTGC ACCACCAAAG CTTCATCTTT GATGCCCTTT GCACCCACAT AAAAGTGAAC
GATATTAATT CCATTCAGCC ATTATTAGAA CTCGTAGCAC AGTTTATTCA CGATTTAGGA
GATGATTTTT TAGTCTACTA TTCTAAGTTT CTACAATTAT TGACGGAAAT CGCACTTGAG
ACCATTCCAA ATGACAGTCA AAATCAGCGG AACACTTCGA ATGTACTTGA GTGGACCTTT
AATTGTTTAG CATTCGCATT CAAATACTTG TCCAGAAGTT TAACATCGGA TTTACAGCCA
ACATTCGAAA TTTTCTTGCC CATTCTCCAA ATGAAAAAGA AAACTTATAT TTCTAGATTT
TGTGCAGAGT CACTAGCATT CCTTGTCAGA AAGCTGAAGG CAGACGCATT GACTTCAATT
ATGATGTTCT GCTTTTCAAA AATAGATTCA ATGGAAGAGT CTGATTCATA CCCAGAGACT
TTGGCTATTT TGTTTGCGGA GTCCATCAAA CACACTAAAG GAACATTTCA TTCGAAAACT
AATTTGATAT TGCTGAAGAT CTTGGAAGTT TCTTTCCACA AGTTAAATAT CCAGAAGAAG
AGTATTTCAA TACTTTCCGA CATAATTTTG GATTTAATTA ATCATGGTAC TCTGGACACA
TGCAAGCAAG TCTACAAGGT GACAATGGAG TTTTTATTAG GGGAGTTAAA AAATGAAAAT
TCTATACCTT CTGTATCACA ACTCTTGACT GTCCTCATTT TTGCTGAATC TGGTAAAAAG
ATTACTGACT GGATATCGTT CACAGAAATA TTAAATGCTT TGTTGGTATA TTTGAGCAAT
TGCCAAGGTT CTACAGAAAA TGATTCACAA TTGGCTGAAC TAACCTCCTA TTTGTTTGTA
ATTGTTCTTA GAAACGGGGA CCTTCAAGTT TTAACAAAGT TGCATAGACA AATTTTTATT
ACAATGTCAT CGTTTTGCGA TGGTAAATAT TTTTTGGCTT TTGCTGAATC TTGCGTTGAT
TTGACAAGAG AAAGAGCGAA GAATTTTGGC CTCCTACATT TCATTCAAAA ATATGTAAAT
CAATTACCTG AAGAGAGCAA TGAAATAAAG AAGGTTGCAT ATCTATTGAC CAAATTGAGT
AAGAATCACT CTGAACTATT ACATCAGATA GAGCTTCCCC TACATATTCA CAATTACATT
CGAAAAGATA TCAAGACACA AGCAGATTTG ATTAGAAATT CCAAGGTTCC CCTTGATTTT
TACTGGTTAT TGCAATTGTC CAAATTTGTT AAAGAAGATG CTGACTGGAA CAATGATTTA
ATTGATCTTT TGTTGCTCCT TACTGAGAAG TTCGACGTTT TACCTCGAAA GCTTTGTTGT
GATTTGATTG CAGCAATTAT CATTTCTTTG TATTCTTCCT CAATTCCAAG ACACGAGAAA
CTTGTAAAGG GAATGAAAAC AGTGTTGTCA ATGATCCTGA AAATTAAGGA GTCTTCGGAT
TTGATTCGTG CTTTGCAGAC TTATATTCTA CGTGAAAGAG ATCAAGCAAA GTTATTTATA
GAGGCCGAAG AAAACTTCTT GATGGAAATA GCTCAGAATT TGAGTTTGCC CAGTAGTCAA
TTACGTTGCA TTTCAGCAGA ATTTCTTTTA ACAGTTCTTG ATACATTGGG TCATGAAAAT
ACTTCGTATG TATCGCAGAT TAGGATTATT GAGCAAATTC CATTATCAAT TACTACGGGT
AGGGATATCA CATTACGAAT TAGGAACTTA GCATCCGATT TTAAGAATGA TCAATCTCCC
AGTGAATTTG ATTGTGTTGT TGTTACAAAT TTCCTTTTCG GGATGTTGAG CAACAGATTT
CAACCTTGTT GGGATGCAGT TTATGAAACT TTACCTTCGT ATGTGCCAAT TTGTTCGTCT
ATACTTTGGG ATATGGCCAG TAAATTTATT CTTACACTGT ATTCTTCGAC TGAAGATACT
TACATGGATT TGGGTTACTC TCCACTTGAA GACAACGAAA TTGTCGATTG GCATGCTAGG
AACCCTCGGT TGAGAGATAA TTTTGTTAAC TACCATGAGA AGTACTTTCT CTCGTACCAG
AATATCACAG AATCATTGTA CGAATTTGCC AAAGAATCAT GGGCAGACAA TTCGTACAAT
GAGTTCATGA GATCTCATAC TTTGAAAGCT CTCTCTTCCA TTCCTTCAAT CGCAGAGGCT
CATTCACAAA GTTTAGTTGA CTTGGTTTTA AGTCTCGAAG ATATCGACAA TGAAGATGAT
CCCTTAGCTA AGAAAGAAAG GTGGCAATGG AAAGATCGTA ATGACCTTCT TGCCTTGTTC
GGTAAATTCA AAAATTTGAA AAAGGTTCAC AAAGCAGACA TTTTGTATGA TTACTTTTTG
AGGCTCCTAT GTAGTAATCA GTTACAGGTC CAAAAGATGG CCCTAGAAGT CTTGCTTCAT
TGGGGAAAGG GCCCAATTAG AAAATACAGG GACAACCTTC AAAATTTGCT AGATGATAAT
ATTTTCCGCG ACGAGCTTTC AAATCTTGCT GTCGGCTCGC AGTCTACAAT CGAGGACCAC
GAAAGAGAGG CAATAATGCC GTTTGTCTTG AGAATTCTCT TCGGACGTGT CCAGGGGTCT
CCAAGAAGCA ATAGCCAAGT CGGACGGAAA TTTGCTATTG TAACAATTCT TCCTAACTTT
TCCGATACTC ACATCATTGA TTTTATACGA TTGGGAGCTA ATAGAATAGG ATATGAAAAA
TTTTTCAGTG GGAAGCAGTT ACCGAATTTA GATAGATTTC TTGTTAGAAG ATTAACAGGT
TTCATAAATC TTTTGAGCGA AATCTACGAT ACTTTGGGAA CAAAGTATGC GTTTGCGTTA
GAATCTACCA TAGAGCCATT GATTTATTCA TTGGTAGTCA CCCAACATTA TATTGATACA
GGCATTAATG AAGTGAATGA AAGGGCTGCT GGTTTAGGAA AGGCTATAAG AAATATTCGA
CTGAATGCCA TGCGATGCTT GGGTAGCTTA TTCAAGATTT TGGATGAAGA ATTTGATTGG
GAACCATATG TTGTGATGAT TTATGAGAAT ATCGTGTCCC CAAGAATAGA GAATTTTGTC
TCCGAAAATT TGCAGCAGAC ATCCTCGTTG TTGAAAGTCA TCACCTGTTG GATTGAAAAG
AAGAATACTA TTCAATTGTT ACTTACGGAT AACTTGGCCC CAGCCTCAGC GGCTATTTCA
TTGCTTAGTC ATGAAAAAAC AAAGGAAGGT GTATTGCTAA CTGTACTTGA CTTCGCAAGA
AAAGTCTTGA AACAAAAAGG TGTTCAAACA GATGAATACT TTTCCTTGCT TGCACTTGTG
GTGTCTACTT TGTTAGACAA TTTGCCTCGC ATAATCGACG GAATCACAGA CCGTGAACTT
GGAAGCATTA CGATTGATGT GTTGATACTT TTGGTGGAAG GCAACTATAT TGACGATTAC
CAGACGAAAA ATTCCATATT GCAATCATTA ACTAGTGCAA TAGATAAGCC AAGAAGTCAA
ATAGAGCTTA AGGACAAGGT TCTTATATTG AGAGTCTTGT CGTCTTTAGT TGACAATTTC
GAGTGCTCCT TCGACAATAT CAAGCCATTG TATGAAACTG TTTCCAAACT GTTCAGAGTA
TATCCCGAGA AAAACGTTCG TCAAATGCTT GTCTCCGTGT TATTGAGCAT TGGGAATAGG
TTTTCAGAAG TACACGCAAT ATCATTGCTT ATTGCAGACT TGAATGCTTT CTCAACAACT
AGATTACAGG AACTAGATTT TGAAAAGAGA CTTGAGGCCT TTAGGAAAAT CAATGAAGAA
GAGTTTTGTT CTTTTGATCC TAATTCATGG TTACCAATAT TGTATTGTTG TTTATTCTTC
ATTAACGATC AGAATGAAAT GGCTATCAGA AGTAATGCTT CCTATTCTTT AAGGCGGTTT
ATTGATTGTT TTTCTTCCAA GGATGAAGAG ACATCACAAA ATTACATTGG GATGCTAAAG
AACATAATCC TTCCACAATT AAGACTCGGG CTCCGTAAAG ATAACGAAGA TGTTCAAAAT
GAATACATTG CTGTCTTGGA ACATCTTGTC TGTTCATCGA AACATTACAA CGAACTTGAT
GATATGAGGA TTCTTACTTT TTCTGATGAT GACGAATCTA ACTTTTTCAA AAATGTTAAT
CACATACAAC TCCATAGAAG ACAAAGAGCA ATCAGGAGAT TGATAGACTA TAGAAGTGAA
CTATCTTCAA ACAGTATTGC TCACTATATT TTGCCAATTG TTGAACGTTA TGCATTGTCA
TCGGAAGAAA AGTTCAAAAA TATTGGGCAT GAAGCATTTG AAACTATTAG TATCTTAGTA
AGGTCAATCT CATGGAATCA GTACAAGGCG TTGTTCAGAA GGTATATTTC AAATTTGAAA
TCAAACAAAG AGGATTTATT AAGAAATCAT GTGCATTTGA TAATTTCTAT TTCTAAAAGT
TTAATGTTGT CTCATTTGGA AAGTCAAGAA TCAGAGATTC TGGATCGTGG GCACCCTTCG
GATCAAGAAG CCATAGACGC ATACATTCTT CAAGAAGTAT TTCCACCTAT TTCAAAAGTT
TTGGTTGTAC GTAATGATGA AACCATTGTC GCTCGTGCTC CTTTGGCAGA AGCTCTTTCC
TACTTAGTTA CTTGCATCAC AGAAGAGAGA ATTGCGTCTG AGTTACCAGG AATTTTGACA
AGTACTTGTC AAGTTATGCG TTCTCGTTCC GAGGAGCTTA GAGACGCGGT CAGGAAATCT
CTTGGAAATA TAGTGAAACT CTTGGGACCA AAATACCTTC GATTTGTATT GAAAGAGTTG
AAGGGAGCGC TATCTAGAGG GTCTCAAATT CATGTGTTGA GTTTTACAAC ACATTATCTA
TTGGCATCAA TCTCTGATAG TCTATCTCAT GGAGACTTGG ATGACACATT GGATATTGTG
GTTGACATTG TTATGGAAGA CATATTTGGA GCGGCTGGCC AAGAAAAGGA TGCTGAAGGT
TATAACAGCA AAATGAAAGA AGTAAAGCAT AAAAAATGTT TTGACGTTGC CGAATTATTG
TCGGCAAATA TTAATTTGAA ATCATTTGGA ACCTTATTAG CCCCAATTAA ACTTTTGCTT
CAAGAAGGCA TATCCTTGAA AACTCAGAAC AAGCTTGATG AATTGTTAAG GAGGTATGCT
CTTGGTTTGA ATCACAATGA CGAATCATCA AATAGGGAAA TGCTCTTCTT ATGTCACGAA
ATTCATCTGG AATCAGAAAA TAGTCCAAAT CAAAAGGAAG GAAAATTTCT CACTCAATCT
GAAAAACATT TCATTGTAAA TTTGAATGCT AAGAAAACAC GGGCTCAGGT AAATAGCACA
ATTTATGTGC AAACATTTCA GAGATTTTCA TTGGAATTGC TCAGAACAGC TATTTCTCGT
CATGATAACC ACTTGACTGT TCCAAATATG GTTGCTTTTA TTCCTTTGTT GGAACAGGAT
CTCAAATCAG AGAGCGAGGG AGTTGTAATC TCATGCTTGA GGATATTGAA CACGGTAGTA
AGACTTCCAT TCAATAATCA GGAGGAAGCT ATATTTACAG CGTCTACAAG AAAAGCACTT
GCTATCATTA AGGAAAACCC AAGCACTAAT GCAGAAATCT GCCAAGCTGC TCTAAGATTT
CTTGCAACTA CAATTAGACA CAAGCCGGAT ATCAAAATAA AAGAATCTGC CATTGCCTAC
ACACTCGAAA GAATTCTTCC AGATTTGCAA GAGCCAAATA AACAGGGTTT GGCGTTCAAT
TTTTTGAAAG CTGTTGTTTC TCAGCATATT ATGATTCCAG AACTTTACGA TGTAATGGAT
AAAGTGTCCA AGATAATGAT TGTAAACCAC TCTAAAGATA TTAGAGATAT GTCAAGAAGC
GTATATTTTA TGTTTTTGAT GGAATATGAT CAAGGAAGGG GAAGACTTGA AAGGCAATTC
AAATTCTTAG TGGACAACTT ATCGTTTCCA ACTGAGACTG GTCGACAATC CGTTATGGAA
TTAATTCACT CGATTGTCAC CAAGGCTGGA CTAGAATTGT TAGATAAATT AGCAACATCC
TTCTTTGTTG CCTTAGCAAA TGTATTAGTA TCTGACGAAG AACCCAAATG CCGTGAAATG
GCATCTTCGT TGATTGGAAA TATAATTAGA AAATTGGGAG CAGGAAATGT TGACAATATT
GAGAAATATT GCTTAGCATG GTCGAAGCAA TCGCAGAATC AATTATTGAA ACGTTGTGGA
CTTAACATCT ACAAGATTTA TGTTGCCGAA TTTGGGGTCG AATCTAATCA AGTCTTAAAG
CAAACAGCAC TTGATAGCAT CAAATTCGCA ATTGAAGCAG GGAATAGCAG CGACGGTGCT
GTTGAGTGGG AATTATTGTA TTCTGCATTA AGTTTGTTTT CTACCCTTAC TTCAAAGTTG
AGGGAGTCTA TATTGGATGA AGAATATGAG TCGATCTGGA ACTCAATCAT AAGGGTATTG
CTATTCCCTC ATTCATGGGT GAGATTGATA TCTTCGCGTA TTATTGAGAT TTTATTATCA
GGACTTGACA CAGTAAAGTT TGAAATTGAC AATTACAAAA TCCAAACCAT CGCATACAGG
CAACTACATC AACTTGCAGC TCCTCAAGTT TCAGAAGATT TAGGAAACCA AATTGTTAAG
AATTTGGTTT TGATATCAAT GAAGTGGGAA AAGGAAAACA CGAAGTATGA ACACGTACAA
ACAAACAACA CCGCTGACCA AAAGTACGAT TATGCTAATG ACTATCTTGT TGCAAGGATA
TGCTCAATTT TGCGCCTGGA CATCAATTCC AATGTATCGT TTGAATCAAG GAAAAGTGCA
ATAAAATTGA GTGCAATGTT ATTGCAAATT ACGGGTGAAG ATAGATTGAG CCTGGTTTCG
GAAAGTTTAT TGCTTGGACT CTTCCAATAT ACTGAACTCG AACCAAAGAA TGGTAACGAG
GAATCATTAG TCACACTTTC ATTGGAATGC TTGCAATTGA TTGAAAACAA ACTTGGTGTC
ACCCAATATA CTACAATTTT CACGAAAGTC AAACAGAAGG TCAATTCAAG AAGAGTGGAA
AGGAAAACGA AGAGAGCACA ATTGGCAGTG AATGCCCCCG ATGTTGCAGC AAGACGAAAG
TTGAGGAAGC ACGAAAGAAC AAGGGAGAAG AGAAAGCACG AAAAAGATGA AAACGGATTT
TATCACAGTA AGAGAAGAAA ATAATCTACC ATTTATATGA TTATTCAAAT TTTAAATTTA
TAGACGTTTA GTTAGGAATT AAATGAAATA GAACTCACT
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| Protein sequence | MAKTAKTKST ESSRRHAFSS FRERIDSIKI EPNLKLTKRV HDYVETSHFL ATLDHWKEVN
LSGNFSEFVD KVEIYSQTLP QILHHQSFIF DALCTHIKVN DINSIQPLLE LVAQFIHDLG
DDFLVYYSKF LQLLTEIALE TIPNDSQNQR NTSNVLEWTF NCLAFAFKYL SRSLTSDLQP
TFEIFLPILQ MKKKTYISRF CAESLAFLVR KSKADALTSI MMFCFSKIDS MEESDSYPET
LAILFAESIK HTKGTFHSKT NLILSKILEV SFHKLNIQKK SISILSDIIL DLINHGTSDT
CKQVYKVTME FLLGELKNEN SIPSVSQLLT VLIFAESGKK ITDWISFTEI LNALLVYLSN
CQGSTENDSQ LAELTSYLFV IVLRNGDLQV LTKLHRQIFI TMSSFCDGKY FLAFAESCVD
LTRERAKNFG LLHFIQKYVN QLPEESNEIK KVAYLLTKLS KNHSELLHQI ELPLHIHNYI
RKDIKTQADL IRNSKVPLDF YWLLQLSKFV KEDADWNNDL IDLLLLLTEK FDVLPRKLCC
DLIAAIIISL YSSSIPRHEK LVKGMKTVLS MISKIKESSD LIRALQTYIL RERDQAKLFI
EAEENFLMEI AQNLSLPSSQ LRCISAEFLL TVLDTLGHEN TSYVSQIRII EQIPLSITTG
RDITLRIRNL ASDFKNDQSP SEFDCVVVTN FLFGMLSNRF QPCWDAVYET LPSYVPICSS
ILWDMASKFI LTSYSSTEDT YMDLGYSPLE DNEIVDWHAR NPRLRDNFVN YHEKYFLSYQ
NITESLYEFA KESWADNSYN EFMRSHTLKA LSSIPSIAEA HSQSLVDLVL SLEDIDNEDD
PLAKKERWQW KDRNDLLALF GKFKNLKKVH KADILYDYFL RLLCSNQLQV QKMALEVLLH
WGKGPIRKYR DNLQNLLDDN IFRDELSNLA VGSQSTIEDH EREAIMPFVL RILFGRVQGS
PRSNSQVGRK FAIVTILPNF SDTHIIDFIR LGANRIGYEK FFSGKQLPNL DRFLVRRLTG
FINLLSEIYD TLGTKYAFAL ESTIEPLIYS LVVTQHYIDT GINEVNERAA GLGKAIRNIR
SNAMRCLGSL FKILDEEFDW EPYVVMIYEN IVSPRIENFV SENLQQTSSL LKVITCWIEK
KNTIQLLLTD NLAPASAAIS LLSHEKTKEG VLLTVLDFAR KVLKQKGVQT DEYFSLLALV
VSTLLDNLPR IIDGITDREL GSITIDVLIL LVEGNYIDDY QTKNSILQSL TSAIDKPRSQ
IELKDKVLIL RVLSSLVDNF ECSFDNIKPL YETVSKSFRV YPEKNVRQML VSVLLSIGNR
FSEVHAISLL IADLNAFSTT RLQELDFEKR LEAFRKINEE EFCSFDPNSW LPILYCCLFF
INDQNEMAIR SNASYSLRRF IDCFSSKDEE TSQNYIGMLK NIILPQLRLG LRKDNEDVQN
EYIAVLEHLV CSSKHYNELD DMRILTFSDD DESNFFKNVN HIQLHRRQRA IRRLIDYRSE
LSSNSIAHYI LPIVERYALS SEEKFKNIGH EAFETISILV RSISWNQYKA LFRRYISNLK
SNKEDLLRNH VHLIISISKS LMLSHLESQE SEISDRGHPS DQEAIDAYIL QEVFPPISKV
LVVRNDETIV ARAPLAEALS YLVTCITEER IASELPGILT STCQVMRSRS EELRDAVRKS
LGNIVKLLGP KYLRFVLKEL KGALSRGSQI HVLSFTTHYL LASISDSLSH GDLDDTLDIV
VDIVMEDIFG AAGQEKDAEG YNSKMKEVKH KKCFDVAELL SANINLKSFG TLLAPIKLLL
QEGISLKTQN KLDELLRRYA LGLNHNDESS NREMLFLCHE IHSESENSPN QKEGKFLTQS
EKHFIVNLNA KKTRAQVNST IYVQTFQRFS LELLRTAISR HDNHLTVPNM VAFIPLLEQD
LKSESEGVVI SCLRILNTVV RLPFNNQEEA IFTASTRKAL AIIKENPSTN AEICQAALRF
LATTIRHKPD IKIKESAIAY TLERILPDLQ EPNKQGLAFN FLKAVVSQHI MIPELYDVMD
KVSKIMIVNH SKDIRDMSRS VYFMFLMEYD QGRGRLERQF KFLVDNLSFP TETGRQSVME
LIHSIVTKAG LELLDKLATS FFVALANVLV SDEEPKCREM ASSLIGNIIR KLGAGNVDNI
EKYCLAWSKQ SQNQLLKRCG LNIYKIYVAE FGVESNQVLK QTALDSIKFA IEAGNSSDGA
VEWELLYSAL SLFSTLTSKL RESILDEEYE SIWNSIIRVL LFPHSWVRLI SSRIIEILLS
GLDTVKFEID NYKIQTIAYR QLHQLAAPQV SEDLGNQIVK NLVLISMKWE KENTKYEHVQ
TNNTADQKYD YANDYLVARI CSILRSDINS NVSFESRKSA IKLSAMLLQI TGEDRLSSVS
ESLLLGLFQY TELEPKNGNE ESLVTLSLEC LQLIENKLGV TQYTTIFTKV KQKVNSRRVE
RKTKRAQLAV NAPDVAARRK LRKHERTREK RKHEKDENGF YHSKRRK
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