Gene PICST_74165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_74165 
Symbol 
ID4840930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp422973 
End bp423951 
Gene Length979 bp 
Protein Length275 aa 
Translation table12 
GC content41% 
IMG OID640392245 
Productpredicted protein 
Protein accessionXP_001386668 
Protein GI126140292 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.426608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGTTTCAG CAGTAAAATG GTACAGGATC AATCTTACTA TAAAAACGGA TTCAACAAGG 
CAATCTCAGA TACACATGCG TCAAGAACGG TTTCAAACAG CGCTGGTTTT GTGATTCCTA
TTCTTGAGCC CAACCACAAG CTTTTGGATG TTGGTTGTGG TCCAGGATCA ATCACCTTGG
ACTTTGCCAA CTATGTGGAA GGAGGTGAGA TCATTGGCGT TGAGCCTACG GAGGAATTGA
TCGATTTAGC CAACGAAAAC AAGGCCAAGT TGGCTGCACA GGGAAAAAAG GTTGACAATG
TCAAGTTCCA GATTGGCTCA ATCTATCAAT TGCCCTTTGA AGACAACTCT TTTGATGTAG
TGTATGCTCA CCAGGTGGTT ATTCACTTGG AGGATCCCAT TGCTGGTCTC AAAGAGCTTA
AAAGAGTAAC CAAACCTAAC GGCTTTGTTT GTGTTCGTGA TGCTGACTTG GAGTCAACTA
CAATCTTCCC TCAGAAGTAC GAAGATACTT TGCGATTCTG GTTCACCAGC AAGGCAGCTA
AATCTACGGA CACCAGAGCT GGTAGATCGT TGAAGTCCAA GGCTATCAAG GCTGGTTATA
TTAGTGAAAA CATCAAGGCG TCAGCTTGGA TCTGGTGTGT TTCGGATGCA GCTGCAAGAG
CTTTCTCAGC GAAAGGAAGC ATCAACAGAA TCCAGAATTC TGGCGAGAAT CTCAAAGTCG
GCGATGAAGA AACAAACAAA AAGAAGAAAC AAGAGATCAT TCAAGCTTGG ACTGAATTTG
CTGATGATGA AGAAGGCTAC TTCACCATGC AAGGTGGTGA AATAGTTTAC CAGAAGGAAG
CCTAAGATAA ACGATTGCAC ACTACAACTA AACGACAATT ACATTTATGT TACGAGTACA
ATGCTTAATG AGTACAATGA TAAACGATTC CTAAATTAGA TATATAATCT TTTGCTATAA
TTTTATTTTA TTTTTGTTG
 
Protein sequence
MVQDQSYYKN GFNKAISDTH ASRTVSNSAG FVIPILEPNH KLLDVGCGPG SITLDFANYV 
EGGEIIGVEP TEELIDLANE NKAKLAAQGK KVDNVKFQIG SIYQLPFEDN SFDVVYAHQV
VIHLEDPIAG LKELKRVTKP NGFVCVRDAD LESTTIFPQK YEDTLRFWFT SKAAKSTDTR
AGRSLKSKAI KAGYISENIK ASAWIWCVSD AAARAFSAKG SINRIQNSGE NLKVGDEETN
KKKKQEIIQA WTEFADDEEG YFTMQGGEIV YQKEA