| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_73970 |
|---|
| Symbol | YNN2 |
|---|
| ID | 4840817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | + |
|---|
| Start bp | 549267 |
|---|
| End bp | 552625 |
|---|
| Gene Length | 3359 bp |
|---|
| Protein Length | 1044 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640392132 |
|---|
| Product | Predicted P-loop ATPase fused to an acetyltransferase |
|---|
| Protein accession | XP_001386500 |
|---|
| Protein GI | 150866788 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1444] Predicted P-loop ATPase fused to an acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.962518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0625315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATTCTGGCAA AGGACAAATA CACAGCAACC ATGGGTAAGA AGGCTATCGA CGCACGTATT
CCGTCGCTTA TCCGGAATGG AGTCCAGGAA AAAGAAAGAA GTTTTTTCTT CATAGTGGGG
GATAAAGCCC GTTTTCAGCT CCCAAACTTG CACTATTTGA TGATGTCTGC TGATTTGAAG
ATGAACAAAT CGGTATTGTG GGCTTACAAG AAGAAATTGC AAGGCTTCAC TTCTCACAGA
CAAAAACGAG AAGCAAAGAT CAAGAAGGAT GTCAAAAGAG GAATCAGAGA TGTTAATGAA
CAGGATCCGT TTGAAGCATT CATCTCCAAC CAGCTGATCA GATATGTTTA CTACAAGGAG
ACCGAGAAGA TCTTGGGTAA CACCTACGGG ATGTGTATCT TGCAAGATTT CGAAGCTCTT
ACGCCAAACT TATTGGCCCG TACCATTGAA ACAGTCGAAG GTGGTGGTAT TATTGTCATC
ATGTTAAAGT CGATGACTTC TTTGAAGCAG TTGTACACCA TGTCTATGGA TATCCATTCT
CGTTACAGAA CCGAAGCCCA TGACGATGTG GTAGCCAGAT TCAACGAGAG ATTCTTGTTA
TCGTTGGGAT CGTGCGAAAA CTGTTTGGTT GTAGATGACG AATTGAACGT CTTGCCTGTC
TCTGGAGGAA AGCATGTGAA GGCTCTTCCA CCTAAAGACG ATGATGAATT GTCGCCAAAG
GCTCAAGAAT TGAAGGAATT GAAGGAGAGT TTGGCAGAAG TCCAACCAGC TGGATCATTA
GTAGGCTTGT CTAAGACCGT AAACCAGGCC CAGGCTATCT TGACATTCAT TGATGTCATT
TCTGAAAAGA CTTTGAGAAG CACTGTAACC TTGACTGCCG GCAGAGGTCG TGGTAAATCC
GCTGCCTTGG GTATTGCCAT TGCTGCTGCC ATTTCCCACG GGTACTCCAA CATTTTTGTC
ACCTCTCCCT CTCCAGAGAA CTTGAAGACA TTGTTCGAAT TCATCTTCAG AGGTTTCGAT
GCCTTAGGAT ATAACGAACA CATGGACTAT GATATCATTC AGTCTACCAA TCCTTCATTC
AACAAGGCTA TAGTGAGAGT CGACGTCAAG CGTGAACACC GTCAAACTAT CCAGTACATC
TCTCCTAGTG ATCACCAAGT CTTGGGTCAG GCCGAGTTAG TCATTATCGA TGAAGCTGCT
GCTATCCCCT TGCCCGTAGT CAAGAAGTTG ATGGGCCCAT ACTTGATCTT CATGGCATCT
ACTATCAACG GTTATGAAGG TACCGGTAGA TCGTTGTCAT TGAAATTGAT TCAACAGTTG
CGTAACCAGT CTCAAAACAA TAATAGAGAA AACAGCCAGA CTGCCGTCAT TTCCAGAGAC
AGCAAGCATA GCGAACAGGA AACTGTAGCC AGAACTTTGC GTGAAGTAGT ATTAGATGAA
CCCATCAGAT ATGCTCCAGG AGACAAGGTT GAAAAGTGGT TGAACAAGTT GTTGTGTTTG
GATGTCTCCT TGTCCAAGAA TGCGAAGTTC GCCACTAAAG GTACACCACA CCCTTCGCAG
TGTAACTTGT TCTACGTTAA TAGAGACACC TTGTTTTCAT ACCATCCTGT TTCCGAGGCT
TTCTTGCAGA AGATGATGGC TCTCTACGTG GCATCGCATT ACAAGAATTC ACCAAATGAC
TTACAGTTGA TGAGTGATGC TCCAGCGCAC CAGTTATACG TGTTGTTACC ACCAATTGAG
GCTGGAGACA ACAGAATTCC TGATCCATTG TGTGTAGTTC AATTGGCTTT GGAGGGTGAA
ATTTCCAAGG AAAGTGTACG TAAGTCCCTT TCCAGAGGTC AAAGAGCAGG TGGTGATTTG
ATACCGTGGT TGATTTCACA ACAATTCCAA GATGAAGAGT TTGCTTCTTT GTCTGGAGCC
AGAGTTGTGA GAATTGCTAC TAATCCAGAA TACGCTGGTA TGGGTTATGG ATCCAGAGCA
CTTGAGTTGT TGCAAGACTA CTTCCAGGGT AAGTTCACTG ATATCAGCGA GTCTAACGAA
TTGAAAGAGA CTTCTATCAC GAGAGTCTCC GAGCAAGAGT TGGCCAAGGG CTCATTGAAA
GATGAAATAA AGTTGAGAGA CGCTAAGAGT TTACCACCTT TACTTTTGAA GTTATCTGAA
AAGGCTCCTT ATTATTTACA TTACTTAGGT GTTTCCTACG GGTTGACACC TAATTTGCAC
AAGTTCTGGA AGAAATCTGG ATTCGTACCA GTATACTTGA GACAGACTGC CAACGATCTT
ACTGGTGAAC ACACTGCTGT GATGTTGAAC GTCTTGCCAG GTCGTGACAA CGCCTGGTTG
CAAGAGTACT CCAAGGACTT CCATAAGAGA TTCTTGCAGT TGTTGTCGTA TGAGTTCAAG
AAATTCCCAG CAGCTCAAGC CTTAAATATT ATACAGGCTA CTGAAGCTGG GGAAAGCTCA
GAGAAGAAGG TCAAAAAATT GACCAGAGAC CAATTGGACG AGTACCTTTC ACCATTCGAC
TTGAAGAGGT TGGACTCGTA TGCCAACAAC TTGTTGGATT ACCACGTTAT TGTGGACATG
TTGCCTTTGA TTGCCCATAT ATTTTTCTCC AAAAGAACTG GCAATGATGT CAATTTGTCT
TCAGTGCAGA GTGCCATCTT GTTAGCTATT GGCTTACAAC ACAAGGATAT GGACCAGATC
TCGGGTGAGT TGAATCTTCC TTCTAACCAG TCGATGGCCA TGTTTGCTAA AATCGTTCGT
AAGTTCTCTG TGTATTTCAG AGCCGTACTT AGCAGGGCAA TTGAAGACTC AATGCCCGTG
TTTGAAGATG AAGCTGTTAA GGAAATGGAC GGACAGGCTG AACATATTGA CTACAAGGCT
ATAGAAAAAG AAATGAAAGA AGACTTAGAC GCTGCTGGGA ACGAAGCAAT GAAGGAGTTG
AGGGAGAAGC AGCGTGAGTT GATCAATGCC ATCAATTTAG ACAGGTATGC CATCGCAGAT
GAAGCCGACT GGGACGCTTC TGGTGACTTG AGCAAGGCAG TTAAGGGCAA GGGAGTGGTC
AGTGTCAAGA GCAAGTCCAA GCGTAAGACT ACAGAGAGTG CCAGCGACAT TTTCGAGCAA
GAGATGAAGC TGGTATCGAA GAAGCCCAAG AAATCGAAAA AATAATATTA AGGGGTATTA
GCCCAAAAAG GATATCAGAT CTGTAAGGCG ATATCGATAG ATCCATCCCC AGGGCACCAC
TGTCCAAATA GGAAAAATGT CGCTCCGCTG ATGAAATTGA CAAGGATCTT AGCAGCATAT
GTATACATAG AATGAACAGC ACTAGAATTA AAAATCTAAG AATAAATACA TTGGTGAAG
|
|---|
| Protein sequence | MGKKAIDARI PSLIRNGVQE KERSFFFIVG DKARFQLPNL HYLMMSADLK MNKSVLWAYK
KKLQGFTSHR QKREAKIKKD VKRGIRDVNE QDPFEAFISN QSIRYVYYKE TEKILGNTYG
MCILQDFEAL TPNLLARTIE TVEGGGIIVI MLKSMTSLKQ LYTMSMDIHS RYRTEAHDDV
VARFNERFLL SLGSCENCLV VDDELNVLPV SGGKHVKALP PKDDDELSPK AQELKELKES
LAEVQPAGSL VGLSKTVNQA QAILTFIDVI SEKTLRSTVT LTAGRGRGKS AALGIAIAAA
ISHGYSNIFV TSPSPENLKT LFEFIFRGFD ALGYNEHMDY DIIQSTNPSF NKAIVRVDVK
REHRQTIQYI SPSDHQVLGQ AELVIIDEAA AIPLPVVKKL MGPYLIFMAS TINGYEGTGR
SLSLKLIQQL RNQSQNNNRE NSQTAVISRD SKHSEQETVA RTLREVVLDE PIRYAPGDKV
EKWLNKLLCL DVSLSKNAKF ATKGTPHPSQ CNLFYVNRDT LFSYHPVSEA FLQKMMALYV
ASHYKNSPND LQLMSDAPAH QLYVLLPPIE AGDNRIPDPL CVVQLALEGE ISKESVRKSL
SRGQRAGGDL IPWLISQQFQ DEEFASLSGA RVVRIATNPE YAGMGYGSRA LELLQDYFQG
KFTDISESNE LKETSITRVS EQELAKGSLK DEIKLRDAKS LPPLLLKLSE KAPYYLHYLG
VSYGLTPNLH KFWKKSGFVP VYLRQTANDL TGEHTAVMLN VLPGRDNAWL QEYSKDFHKR
FLQLLSYEFK KFPAAQALNI IQATEAGESS EKKVKKLTRD QLDEYLSPFD LKRLDSYANN
LLDYHVIVDM LPLIAHIFFS KRTGNDVNLS SVQSAILLAI GLQHKDMDQI SGELNLPSNQ
SMAMFAKIVR KFSVYFRAVL SRAIEDSMPV FEDEAVKEMD GQAEHIDYKA IEKEMKEDLD
AAGNEAMKEL REKQRELINA INLDRYAIAD EADWDASGDL SKAVKGKGVV SVKSKSKRKT
TESASDIFEQ EMKSVSKKPK KSKK
|
|---|
| |