| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_73960 |
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| Symbol | |
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| ID | 4841085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 807054 |
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| End bp | 811091 |
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| Gene Length | 4038 bp |
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| Protein Length | 1335 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640392400 |
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| Product | predicted protein |
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| Protein accession | XP_001386567 |
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| Protein GI | 150866838 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.847897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGGAAAGGAA CTGTAAGCAC TGAACTTGCC AATATGGAAG TACCAGCCGA ATCCAACCGC
CAGCCGCTGG ATACTTCTAC TCCCACGTCT ACGGCCATCA ACAGATATAT AAGAGAAACG
GAATTGGGAG AACATATCAT CAACGGAAGC ACTTCAACGG CGCAGACTTC AGCATATGAA
CCAGACAAGT CTGAACAGCA GTTGGGCTTG CCGGACGTGG AATCAATTCT GCTCAGATCA
GGAACTGGAA GCACCGATGA AAATCTCATT GAAAATGTGA AAGTATCGCA TGTTGCAGGT
GTTATAGATC ACATCGAAAA ATTGGGAAAC CAGGTCAAAG GAGAACAAAA TGACGACGAC
AAAATAGACA AGAATGACAA AACGCATGAG TTTCAAAGAG AATCCGAATA TCTGCTGACG
AACTCCCAAA AACGTTTGAA TCCGATTCAA GAAGAAGAGC ATATGAGCAA ACTGAAAAGC
ATTGAAAATC TGCAAGAAAA CAACTCATCC ATACTTGATG ATGCTTCACC CAATAGAATT
ATCAAACCCA GCAGATATCA GGAAAAACTT CTGTATCTTC CCAACAGCAT GTTCCACGTT
GATAAGGACA GCTCCATGGC ATTTGCGCTG GAAATCCAAG ATTCTCCGTT CAGTTCCATC
CCAAACACAT TCAAGTACAA GTCACATCCC AATGCAAAGA CTAAAGCAAC TCTAGGTGGA
ACACGATTGA AAACTGTTGA TAGACCTTCT GGTTCTGAAG AAACTAACAT GGAAGACAAC
AGTGAGCCAA TAAAGACTTC GACAATTAGA GAAAACCACG TAGATACTCC GGATTGGATG
CCAGAAGAAT TGGACGACAA ATGGGATGAG CCCAAGAGTG ACTTCTTGTC TTCAGTCAGA
ATCACAAAGA GGGACAAAAC ATCGAGTGAT CCCGTCGCAG ATTTGGATCT TGAGTTTCCT
TCGGGGAACA CCATTTTGCA CAATTCCAAG TTCAGCTCAC TAGATACGCC AGCTTGGAAA
CGAGCAGTAA GAGAGCAAGA TCAAAAGGCA AAACTGCAGC CCAACTTCCA GAACATCTTT
CTTTCTCTAG AATCACAACA TGATAAGTCG GATAATGTCA ATGCCAATAA CCACTCTGTT
TCGTCCACTT TTTCCACGCC AATGGCCACT ATTTCACACC AGAATCTTAA GCAATCGGAC
AAGGATGATA GAAATAACAA AAACAAGATC GCCGAGGATG TCAACCAACA AGGCTCTCCT
CTTAAATTGT TTGGCACTAA TTACAATACC TTTACAAAAG AAAAGTTAAG CGGCGTATTG
CAGAAATTTC ACCAGCTGAC GCCACCAGAA GAAGATCCTA AAAATAAGGG AAGTGATGAA
ATCGATGTTC AGCATAAGGA AGATGACAGT TTGAATCTCC AGAATGAACA TTCGGAGATT
CCCCGCTTGA AAATCAAGAA TTTCACCAGA AGCAAGAATT ATACAGAAGA GCATTTCATC
CAGAATGCAA ACAACGTATA CAATAATATT CAAAAACGAG GATTCAAGCC TGCTCATGAT
GAAGGATTCC GATCTATGTC TAATGCTCAT ACTACAGCTA CTTCTACTCC GAAGAGCCAC
AAGTTAATTC CTACCAGTGA TCCTATATTT CAAGATGATA ACTCTTCTTT TACGAGTGAC
TTTGACGAAG AGAGTTCTGA TTACAAGTAC CAACAGTTCA ATTCAGATGC AGTGAATAAT
GACTATACGT CTTATGATCA CAGTACAAAT AATGGTGCGT CTGCTTATCC GCATGCTAAA
ACTTCTAGTA TTCCAGATGT CTCTGAGCAC AGCGATGATA GTTCCTACAC GTTTGATGAT
GTCTCTCTGA CAAGTCCTGA ACTTCAGAAA CCTCGATTCA GACCCAACTC AAAGAAACAA
GCATTTACCA ATGACCAGAA TAACCTTCGC AGTCAACAAG CTGTTCAAAC AAGGGATGTA
ATAGAAAACT CAGAGGCACA CGTCAATTCA GATCTCATGC ATTTGGTAGA AATTCTCAAG
AATGAAAACG ACAGATTGAA ACAACAATTA CAAAGTGGTG TCAATTTGCT CAATGAAACC
GAAGTTTCTT TAGATAATGC TGACTTCACA AGCGAGGGTG TATCACAATT GCAAGACTTG
ATAAGATGGA AACGAGCTTC ACAACTCCAT TTACCAACAG ATACATTACC TTCCTCCCAT
AGTATCGAGA AGAATTCTGA TCCCAACACA ATTATAAGAG GAAGAATTAA ACCCGGAGTC
GACTTACCAG TTGCCTACGA TAACATGGTC CTCGATGTTA AGAATCAAAA ATGGGTTGCT
AGCGAAAATA AGGAAAACTA TCCAGGAAGT CTTGATTCAA TTGAAGATCT TGTGACAAAC
TCCACAGAAT TTCCAGATGT CAGAAGACCA CTCAGCAAAC CAAATTCAAA TAATATTATG
ACGAAGAATC TGAGACCAAA TAGTAGCAAA CTCGAAGTTT CTTTTCAATT GCCGCATTCA
GACCAAGAAA AGGATAGGAC CAGATCACCA ATTAACGCTG AGGTTACAAG TGTTTCTCAA
CTTGATGAAA TTACATTTTC ACAAACAAGA AAGAAGTTGG TTTCTATCAT TAATGATATT
CTTTCGCTTG AGGATACGAT CAATATCCCG TGGGATGAAA TTAATGAAAT CTCCTTATCT
AATCGCAATC TTGATAGTAT TAAGGATTTG GATACCTTTT TGCCGAGTTT GATAAGTGTG
GACTTATCTC AGAATGAACT CAAGTACTTG GAAGGCTTAC CCAAGTCGAT ATTGAATATC
GATTTGTCGG AAAATAGAAT CGAAAATATT ACACCGTTCC ATAGATTCCG TGACCTTCAG
TATCTTGACA TTTCGTCCAA CAATTTAGTA ACGCTCTCCA ATTTCAGCAA AAACATTCAT
CTCACCAATT TGAATGCTTC AAAGAACCAG TTGAACTCCT TATCTGGATT ACAGACTTTG
GTGAATCTCG CCAAGTTCAA TGCCTCTCAG AATGAATTGT CAGGATTGTT AGATTTCGAC
AACTACTTCC TTCCAAATTT GCAAGAACTA AACTTGTCAG AAAACTCACT TCAGTCTATT
TCTGGATTGG AGACGTTGTC AAACTTGCGA GTTTTGAATG TAAATGAGAA TAAGCTATTT
GACATTTCGT GTAGAGGGAA ACATCCACAT TTGAAGAAAT TGCTATTGAA ATTTAACCAA
CTTGAAAAGC TTGATGTGCT GGCATTTCCT TTCTTGCGAG TACTTAGGGT TGATGGTAAT
GACTTAAGAA ATATATCAGG GTTACTGAAG CTCAAACACT TGGATGAACT ATCATGTAAA
GCTCAACGTA GTGTTGCAGT TATTGAAGAA GTTTTCCGTC ACGCCAGAGA TGTTCAGAGT
CTTGATTTGT CAGGAAACAT GGGCTTGACT TTGTCAGGAT ACAACTTTCC TTTCCTTAAT
TTGAATAAAT TGGAATTGAC AGCTTTGGAC TGGACTAGAG TCCCTGACAA CTTTGCTGCC
ATATTTCCAA ACGTTAGAGA TCTAAACTTG AATTTCAACA GGTTGACCAA TATTGACGGG
CTTGCCAAAT TGACCAACTT GAGAAAGGTT TACCTTGTCA GTAACAAGAT CCAACGAACC
GAGACTGTGG TAACTGGATT GCTTGGCTCG AGGTCCAGTT TGAGATTGTT GGATTTACGA
CTTAACCTGT GCAACATTGA CTTGTATCCT TACGTATTTA GTCCAGATGA ATTGGAGTAT
GCTAAAGTTC AAAACTACGA AGATTGCAGT CCTATTCATT TGGACAACCT AGAGGACATC
GAAAGCTTTG CTATTCACTA CAAATCGCTA AGCAAGGGTG TAGACGAGTG GACCGAGAGA
GATTCTCAAT TCATCAACAA GTTGTCTATC CAGTCTACAC TGAAGGTACG TCTCCGTTTG
AATTACGAGA CTTTGCTCAT CAACTATTTC CGCCGGTTGA GCCGTCTTGA CGGTGGACAT
GTCAGCGACG AGAAACGA
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| Protein sequence | MEVPAESNRQ PSDTSTPTST AINRYIRETE LGEHIINGST STAQTSAYEP DKSEQQLGLP
DVESISLRSG TGSTDENLIE NVKVSHVAGV IDHIEKLGNQ VKGEQNDDDK IDKNDKTHEF
QRESEYSSTN SQKRLNPIQE EEHMSKSKSI ENSQENNSSI LDDASPNRII KPSRYQEKLS
YLPNSMFHVD KDSSMAFASE IQDSPFSSIP NTFKYKSHPN AKTKATLGGT RLKTVDRPSG
SEETNMEDNS EPIKTSTIRE NHVDTPDWMP EELDDKWDEP KSDFLSSVRI TKRDKTSSDP
VADLDLEFPS GNTILHNSKF SSLDTPAWKR AVREQDQKAK SQPNFQNIFL SLESQHDKSD
NVNANNHSVS STFSTPMATI SHQNLKQSDK DDRNNKNKIA EDVNQQGSPL KLFGTNYNTF
TKEKLSGVLQ KFHQSTPPEE DPKNKGSDEI DVQHKEDDSL NLQNEHSEIP RLKIKNFTRS
KNYTEEHFIQ NANNVYNNIQ KRGFKPAHDE GFRSMSNAHT TATSTPKSHK LIPTSDPIFQ
DDNSSFTSDF DEESSDYKYQ QFNSDAVNND YTSYDHSTNN GASAYPHAKT SSIPDVSEHS
DDSSYTFDDV SSTSPELQKP RFRPNSKKQA FTNDQNNLRS QQAVQTRDVI ENSEAHVNSD
LMHLVEILKN ENDRLKQQLQ SGVNLLNETE VSLDNADFTS EGVSQLQDLI RWKRASQLHL
PTDTLPSSHS IEKNSDPNTI IRGRIKPGVD LPVAYDNMVL DVKNQKWVAS ENKENYPGSL
DSIEDLVTNS TEFPDVRRPL SKPNSNNIMT KNSRPNSSKL EVSFQLPHSD QEKDRTRSPI
NAEVTSVSQL DEITFSQTRK KLVSIINDIL SLEDTINIPW DEINEISLSN RNLDSIKDLD
TFLPSLISVD LSQNELKYLE GLPKSILNID LSENRIENIT PFHRFRDLQY LDISSNNLVT
LSNFSKNIHL TNLNASKNQL NSLSGLQTLV NLAKFNASQN ELSGLLDFDN YFLPNLQELN
LSENSLQSIS GLETLSNLRV LNVNENKLFD ISCRGKHPHL KKLLLKFNQL EKLDVSAFPF
LRVLRVDGND LRNISGLSKL KHLDELSCKA QRSVAVIEEV FRHARDVQSL DLSGNMGLTL
SGYNFPFLNL NKLELTALDW TRVPDNFAAI FPNVRDLNLN FNRLTNIDGL AKLTNLRKVY
LVSNKIQRTE TVVTGLLGSR SSLRLLDLRL NSCNIDLYPY VFSPDELEYA KVQNYEDCSP
IHLDNLEDIE SFAIHYKSLS KGVDEWTERD SQFINKLSIQ STSKVRLRLN YETLLINYFR
RLSRLDGGHV SDEKR
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