| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68551 |
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| Symbol | CAD5 |
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| ID | 4841105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 889466 |
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| End bp | 890651 |
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| Gene Length | 1186 bp |
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| Protein Length | 351 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640392420 |
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| Product | hypothetical protein |
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| Protein accession | XP_001386762 |
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| Protein GI | 126140480 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.45922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | AATTTATCCG TTAATTATGT CTAAGGTTTT TATCACTGGA GCCACAGGGT ATATTGGTGG
TCAGGTGTTG TACGAATTGT TGAACAACAA AGACGGTAGG AAGTATGATG TTACTGCCTT
AGTGAGATCT CAACAAAAGG CCGAGAAGTT GCTTATTGGT ACAAACAACC AGATTTCTAC
TGTAATTGGA AGCCTTGATG ATGTGGACTT TATTAAACAA CAGGTAGAAG CTAATGATAT
CATCATTAAC ACTGCAAATG TGGACCATGT TCCAAGTGCT CAGGCTGTTT CTGATGCTTT
GGTAGCTTCA AAAGACAAGA AGATCTATAT TCATACTTCG GGTACTTCTA TTCTTGGTGA
CGGATTATCT CCCGATAAGG GAGATTCTCA CAAGGTTTAC TCCGACAAAT ATAGCATTGA
CGAGATCAAC TCTTTTCCAG ACACACAGCC ACATAGACCC GTGGACAGAA TTGTTCTTGA
CATTCACAAC AAGAACCCCA ACGTCCAAGT TGTGGTGATC TGTCCTTCTA CCATCTATGG
TATCAGTAAT GGTTATGATA ACTTGGTTTC TGCCCAGGTT CCATTGTTGA TTACCTCTTT
CGTTAAGTAC GGTAAGGGCT ACACTGTTTA CAAAGGCGAT GAAATCTGGA ACCACATTCA
TATCAAAGAC TTGGGTGACT TATACTACTT GATCTTGACC AAGCTTCAGT CTGGTGAAGA
TATTCCAGTT AATGGTACTG GTTATTATTT TGGATCTTTA GCTATAGAAG GTGAAGAAAC
CATTTCCAAT GAACCTTCTT CCATTGAACA CAGATGGAGA CAGGTTTCAG AGGTGGTAGC
TGAAAAGTTG TTTACTAAGG GACTTATTGG CTCCAAGGAA GTTGTATCTC TTGAACCACA
GGAAATCGCT AAGATCAACG ACAGTGAATG GTCTCCTTTC TACTGGGGAA CCTATTCCAG
AAGCAGAGGT GACAACGGCT ATGCTATTGG CTGGAAACCC AAGTTCACTA GCAACAAGGA
ATTCTTTGAT TCCTTCGATG CTGACATTGA CTACTTAGTT AAGAGGAACT AGGGTCTCTA
TAAAAGAAAG AAAGCATACT TATATAAGAA ATATGGATTT GTCGTTTGTT TCATTTTACG
TTGTATTAGA ATGAATACAA TCTAATGTAA GAGATTAGTA TTTTTG
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| Protein sequence | MSKVFITGAT GYIGGQVLYE LLNNKDGRKY DVTALVRSQQ KAEKLLIGTN NQISTVIGSL
DDVDFIKQQV EANDIIINTA NVDHVPSAQA VSDALVASKD KKIYIHTSGT SILGDGLSPD
KGDSHKVYSD KYSIDEINSF PDTQPHRPVD RIVLDIHNKN PNVQVVVICP STIYGISNGY
DNLVSAQVPL LITSFVKYGK GYTVYKGDEI WNHIHIKDLG DLYYLILTKL QSGEDIPVNG
TGYYFGSLAI EGEETISNEP SSIEHRWRQV SEVVAEKLFT KGLIGSKEVV SLEPQEIAKI
NDSEWSPFYW GTYSRSRGDN GYAIGWKPKF TSNKEFFDSF DADIDYLVKR N
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