Gene PICST_68496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_68496 
Symbol 
ID4840911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp552684 
End bp553550 
Gene Length867 bp 
Protein Length244 aa 
Translation table12 
GC content42% 
IMG OID640392226 
Productpredicted protein 
Protein accessionXP_001386700 
Protein GI150866935 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0633704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG AGGAGTATAA GCAGGTTGTA GTGATAGCTT TTGGGGGACC TTCTTCTTCG 
GGAAAGACCA CTTGTGCCAA AGCTGTGCAT TCCTTGATCA AGAATTCCAG GTTGATTCAT
CTTGATGATT TCTATTTAGC TGACCACCTC ATCCCTGTTG ATCCCGTTAC TGGTCAACAG
AACTGGGACG TTCCAGAGGC TCTTGACTTC GCACGTTTCA CATCTTACAT CAAATCAATA
AGACAGAGCC ATAATCTAGA AGACAAGATC GACACATTGG AACCTGACAC GAATTTGAAA
TTGACTGCTC AAGAAGTGCA GCAGTTTGAA GCCAAGATCG CTCAAAATAT ACCGGATCTA
GATAACACCT TGCTTGTGTT GGTGGACGGA TTTATGTTGT TTCATGATCG TGAAATTATT
CAGTTGTTTG ATGTAAAGCT ATTTTTCCAT GCATCATTTG AAACACTTAA AAATAGAAGA
GAGCTGCGAA AGGGCTACAA CACCGTAGAG GGATTCTGGG TGGATCCTCC AAACTACTTC
CGTGACATGG TTTGGCCAGC GTATGAATCT AGCCACAAAT ATCTCTTTGA AAATAAGGAT
GTCGATGGCG TGTTGAAATC AGAGTATAAG ACGCAATACC AAATCCACGA TATACGAAAT
GAAACAGGGG TGAAATTGTA CGAAGTTGTA GACTGGCTGC TCCAACACAT ATTCGCCATG
GTCAAGCGGT TGTAGGCGGG CTCGAACCTA CATGGCTGTA TTAAGCTCCT TCCAGGGTTT
ACTTCTACAT GGTATTACCC GAAATTGTAT TTAGTATACG TACATTATTA TTTAGACGCA
CCCATAGATT CTACATTATT TTTCTTC
 
Protein sequence
MTHEEYKQVV VIAFGGPSSS GKTTCAKAVH SLIKNSRLIH LDDFYLADHL IPVDPVTGQQ 
NWDVPEALDF ARFTSYIKSI RQSHNLEDKI DTLEPDTNLK LTAQEVQQFE AKIAQNIPDL
DNTLLVLVDG FMLFHDREII QLFDVKLFFH ASFETLKNRR ESRKGYNTVE GFWVDPPNYF
RDMVWPAYES SHKYLFENKD VDGVLKSEYK TQYQIHDIRN ETGVKLYEVV DWSLQHIFAM
VKRL