Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_68496 |
Symbol | |
ID | 4840911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 552684 |
End bp | 553550 |
Gene Length | 867 bp |
Protein Length | 244 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392226 |
Product | predicted protein |
Protein accession | XP_001386700 |
Protein GI | 150866935 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0633704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACG AGGAGTATAA GCAGGTTGTA GTGATAGCTT TTGGGGGACC TTCTTCTTCG GGAAAGACCA CTTGTGCCAA AGCTGTGCAT TCCTTGATCA AGAATTCCAG GTTGATTCAT CTTGATGATT TCTATTTAGC TGACCACCTC ATCCCTGTTG ATCCCGTTAC TGGTCAACAG AACTGGGACG TTCCAGAGGC TCTTGACTTC GCACGTTTCA CATCTTACAT CAAATCAATA AGACAGAGCC ATAATCTAGA AGACAAGATC GACACATTGG AACCTGACAC GAATTTGAAA TTGACTGCTC AAGAAGTGCA GCAGTTTGAA GCCAAGATCG CTCAAAATAT ACCGGATCTA GATAACACCT TGCTTGTGTT GGTGGACGGA TTTATGTTGT TTCATGATCG TGAAATTATT CAGTTGTTTG ATGTAAAGCT ATTTTTCCAT GCATCATTTG AAACACTTAA AAATAGAAGA GAGCTGCGAA AGGGCTACAA CACCGTAGAG GGATTCTGGG TGGATCCTCC AAACTACTTC CGTGACATGG TTTGGCCAGC GTATGAATCT AGCCACAAAT ATCTCTTTGA AAATAAGGAT GTCGATGGCG TGTTGAAATC AGAGTATAAG ACGCAATACC AAATCCACGA TATACGAAAT GAAACAGGGG TGAAATTGTA CGAAGTTGTA GACTGGCTGC TCCAACACAT ATTCGCCATG GTCAAGCGGT TGTAGGCGGG CTCGAACCTA CATGGCTGTA TTAAGCTCCT TCCAGGGTTT ACTTCTACAT GGTATTACCC GAAATTGTAT TTAGTATACG TACATTATTA TTTAGACGCA CCCATAGATT CTACATTATT TTTCTTC
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Protein sequence | MTHEEYKQVV VIAFGGPSSS GKTTCAKAVH SLIKNSRLIH LDDFYLADHL IPVDPVTGQQ NWDVPEALDF ARFTSYIKSI RQSHNLEDKI DTLEPDTNLK LTAQEVQQFE AKIAQNIPDL DNTLLVLVDG FMLFHDREII QLFDVKLFFH ASFETLKNRR ESRKGYNTVE GFWVDPPNYF RDMVWPAYES SHKYLFENKD VDGVLKSEYK TQYQIHDIRN ETGVKLYEVV DWSLQHIFAM VKRL
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