| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68431 |
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| Symbol | |
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| ID | 4840839 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 146682 |
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| End bp | 148822 |
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| Gene Length | 2141 bp |
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| Protein Length | 481 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392154 |
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| Product | predicted protein |
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| Protein accession | XP_001386627 |
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| Protein GI | 150866885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.326918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAAGATCAAA TCAAATCGTG TTGGAAACGG ATCCCATCGA AAGAAACTAC AGACCGCGGT
TGATTGATTG ATTTGTATTT AACCACTACA TAGTTTCTTG TTTAGTTGTA TACATTTCCA
TACAATATTT CAATAAACTG ATCTATATAA CACTTGCACC ACAAGTTGTA CTCCGTATCT
ATAGCTAGAT AGATAACAAC GCCATAAAGC GAAGGAAAAC GAAACTAAAC CAGCAAAGAC
AAAACTTCTA TCTTTTTCTA TTCTAATCCA TTAAAAAAAT GTCCAGCTAC GAAGACGACG
AAGCTCTTTT CGAAGACATC TAGTATGTAT TAATTTGATT TTTAGGCAAA TTTAATTTGT
GCATTTTATT CGGTAGAAGC GAATTACGAG ATTCCACACC CAGCATATGA GCAGGAAGGT
CTAGAAGGCA CAATCAGATA TCCGGCTACT GGCGGGGATT GCCGCCAGCT CAAGATCCAC
AAGTTAAAAT TGCCAACGGA GTTTAGAAAA ATTCACATGC TAACTTACGA ATCTATAGTG
ACGATGATAA TGAAGTCGCA AAGGAAAAGT CGACAGAGAA AAACAACGAA AACAAAGACG
CTGAGACTGA GGCTGAAAAA CAGGATCAGA AGCCTGAGGC CGAAACTTCT GCTGCTTCCG
TCCCTGAAGG TCTGACTTCT TCTTCCAATC AAGCCGCTGC TACAGCCACT ACATCTACTT
CTGTGTCTGA AGATCAGCAG CAACCAAATT TGCAACCTCC TGCAGCTGCT TCTCAACAAG
CAGACCAATT GCAGCAGACT CAACAGAACC AACCGATTGG CCAGCACCCT TTCAATTCTT
CTCTCTCTTC CTATACTGGC CAACCAGCAT ATCCTGGCGC TGATCCCAAC CTCCACCAAC
AGTATCCACC TGTTCCTCCT CCTCCACAGC CTCCTGTTCA ACACCAGCCT TCTAGCATGG
GCAGGGAAAC AGGAAAAATG TTCATTGGTG GCCTCAATTG GGACACCACA GAGGAAGGCT
TGGTTCTGTA CTTTTCCAAG TTTGGAGAAG TTGTAGACTA CACCATCATG AAAGACAACA
ACACCGGAAA ATCACGTGGG TTTGGTTTCT TGACCTTCAG AGACCCAAAG TCTGTAGACG
AAGTCATCAA GACTGACCAC ATCTTGGACG GGAAGTTAAT TGATCCCAAG AGAGCCATTG
CCAGAGAAGA GCAGGACAAG GTAGGCAAGA TTTTTGTAGG TGGTATCGAT CCAATGGTCA
ACGAAAAGGA GTTCCATGAC TTCTTTTCGC AATTCGGAAG TATCATCGAC GCCCAGTTGA
TGATTGATAA AGATTCCGGT AGATCCAGAG GGTTTGGATT CATTACGTTT GACTCGCCTG
ATGCCGTGGA CAGAGTCACT GTCAACAAGT TTTTGACGTT GAAGGGCAAG GCCATGGAGG
TCAAGAGAGC GGAACCTAGA GGCCAACATC AGCAAAACCA AATGCAACAG CAGCAACAGC
AGCAGCAGTA CAATTACAAC TACGGTAACC AATACGGTCA AGCTTATCCT CAAATGGCTT
ATGGTCAACA GCAGATGGCC CCTGAAATGG TCGAATATTG GCAAAGAATG CAACAGTGGT
TTATGTTCCA GCAACAGGCC CAGGGTGCTG GTGGTGAACA AAAAGATGTG GAACAACCTG
GCCAACCATT GAACCCACAA CAACAAGCCA ACGAACCTGA AGGTGATCCA GAGCAAAATT
CCGACAGAAA CAATGAAAAT GCTAATGATG ACTACAGAGG TGGCTATGAC AACGGCCAAA
GGGACCAAAG GAGAATGAAC TTGCCAAAGG GCCCAAGAAG GGCTCCACCT TCCGGTCCTT
CTGGCAGCAG AGGAGGAAGA GGAGGGTACC ACAAGAGAAG TAGAGGCTAC CATCCTTACA
ACAGAGGTGG TAGAAGATAG TTTATACACC GCACAGAAAG TAAAATACAG GCACATCACG
GTTATATTTT TATTAAGATT ACACCTATTT ATCCGTTAAG TTATCGTTAT TTAGTAATAC
TATTGCTATT AATGTTGATT TCAAGTTGCA ATGTCATCTA TTTATCTATT TTTTCATGTC
ACCGTTATAT AGTACAGCCA TTATCAAAAA TACAATCCTA A
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| Protein sequence | MSSYEDDEAL FEDIYDDDNE VAKEKSTEKN NENKDAETEA EKQDQKPEAE TSAASVPEGS
TSSSNQAAAT ATTSTSVSED QQQPNLQPPA AASQQADQLQ QTQQNQPIGQ HPFNSSLSSY
TGQPAYPGAD PNLHQQYPPV PPPPQPPVQH QPSSMGRETG KMFIGGLNWD TTEEGLVSYF
SKFGEVVDYT IMKDNNTGKS RGFGFLTFRD PKSVDEVIKT DHILDGKLID PKRAIAREEQ
DKVGKIFVGG IDPMVNEKEF HDFFSQFGSI IDAQLMIDKD SGRSRGFGFI TFDSPDAVDR
VTVNKFLTLK GKAMEVKRAE PRGQHQQNQM QQQQQQQQYN YNYGNQYGQA YPQMAYGQQQ
MAPEMVEYWQ RMQQWFMFQQ QAQGAGGEQK DVEQPGQPLN PQQQANEPEG DPEQNSDRNN
ENANDDYRGG YDNGQRDQRR MNLPKGPRRA PPSGPSGSRG GRGGYHKRSR GYHPYNRGGR
R
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