| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64717 |
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| Symbol | TAF5 |
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| ID | 4840945 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 507439 |
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| End bp | 509820 |
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| Gene Length | 2382 bp |
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| Protein Length | 782 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640392260 |
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| Product | TFIID and SAGA subunit |
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| Protein accession | XP_001386490 |
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| Protein GI | 150866779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0491121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAG ACAATAATAA CAGCAATGCC ACCAATCAAC CTCACGAGTT GAACCCTCCC
ACGTCTGTCG GGGGATCTGC TGGCACAGAC TCTAGTCAAA CACTGTCTCA ACCATCACAA
CCTTCCCAAG CTGGATCGGT ACGAGCTCCA GCCAATCAGA CGGCATCGCA ACCAGCTCAG
CCCAGGGGCC AACAGCCACT GTTCTCACAA GCAGATTTGA ACCGAATTGT TCTTGAATAT
CTCAACAAGA AAGGATACCA TAGAACAGAA TCAATGTTGA GATTAGAAAG CTCCAATACT
CCCACACCAG CAGTAACGCC TGTGAGTCCA GCGACAAGTC TGTTGGCTAG TCCAGGCGAA
ATAGTATCAC CAGCCAATGC TGCTAGAAGG GAAAAGGAAT TAAAAGATAA ATTGAACAAG
AACGACCGCG AGATGAGAGA ATTGAAGGAA AGACAAGCCA GAGTAGAGCG AGAATTGAGA
GAAGCAAGAG ACAGAGAAAT TCGCTTGGTT AAAGAGAAGG AATTGCGCGA AATCAAGGAT
TTGGAAGAGA AGAAGAAACG CGAAAATGAT CCAGACGTCT ACTTCACTGT GTACTCTATG
TTGAAAAAAT GGGTTGATAC GTCGTTGGAC TTGTACAAGC CGGAGTTATC GCGTGTATTG
TATCCGTTGT TCATCCACTG TTTCTTTGAG TTGATCTCGA AGAACTTCGT GGATCTGGGA
AAGCGGTTCT TTGACAAATT TAAGAGCGAC CATATTATCT TGCACGGTGT AGAAATCAAC
CAGTTGGCAG GCATTCTGTT GCCAGAGCAT TTGAAGGAAA ATGAGTTGGC ACTTGCTTAC
AGAAGAAATA AGTACAAGAT CGTTGTTTCC AAGACGTCGA TGAATTTGTT ATTGTACTTT
TTGCACGAAA ATGAAGCTGT AGGTGGAGCT ATCTTGATTC GTATCATCAA CCAGTATTTG
GATACAGTCA TTTCCAGCGC CAAGCTCGAC AAAGTAGACC AGGAAGGCGA AGCCAATCCC
GAAGAAGGAA TTCCACAGTA TGTGGCCAAG ACAAACGAAA TAGATAAATT CAACGAACAA
CTGGTAAAAT TGGGAAAATT CCCTATCGAC CCTGAAGTCC AGAAGGAAGT AGAAGCTGAG
CTCAAGGTTA AGGATGAGAG ATCCTCTCCA GTAAATGGAA AGACTTTGGT AGAAGAATTC
GCTGAAATGA CAAAACCAGA AACAGATTCT CCAGCCAGAG AAGCTTTGCC TCTTCCTCTT
AAGGACCATG CTGATATCAA AAGAATGATA TTAGATGTAG AGGATTCCAG ATCCAAGATC
AAGTTGGGAG CCTTACAAGC GTCTGCCCCT TCCGTTTGTA TGTATACTTT CCACAACACT
TCCAACGACA TGACATGCAT AGATTTCAAC GAGGATTCCA ATATGATAGC TGCTGGATTC
CAGGACAGTT TCATAAAGTT GTGGAGTTTA GATGGAAGAC CACTTAAATC TGTATTTAAG
AGAGATCGCT ACAACTCTGA CAACACCCGT AAGCTCATTG GCCATAGTGG TCCTGTTTAT
AGCGTGTCAT TCTCACCAGA CAACAGATAC CTTTTATCTG GTTCAGAGGA TAAAACAGTG
CGACTCTGGT CGCTTGACTC TTACACAGCT CTTGTATCAT ACAAGGGACA TAACCAGCCT
ATTTGGGATG TCAAATTCTC ACCATTGGGC CACTACTTCG CTACAGCTTC TCACGATCAA
ACTGCCAGGT TGTGGGCTAC AGACCATATC TATCCCTTGA GGATATTTGC TGGCCATATC
AATGACGTGG ACTGCGTAGA ATTCCACCCT AACTCTAACT ACGTGTTCAC TGGTTCGTCT
GACAAGACAT GTAGAATGTG GGACGTACAG ACTGGTAACT GCGTCAGAGT GTTTATGGGC
CACACTGGGC CTGTGAACTG CATGGCAGTT TCTCCAGACG GTAGATGGCT AGCCAGTGCT
GGCGAAGACA GTGTAGTCAA CATCTGGGAC GCTGGAACTG GCAGACGTTT GAAGACAATG
AAGGGTCATG GCCGTTCTTC TATCTACTCT TTGTCCTTTT CTAGAGATGG TGGTGTCTTG
GTTAGTGGAG GTGCCGATAA TACTGTGAGA GTATGGGATG TCAAGAGAGA CACAAATGAT
GCTGGACCGG AGCCAGAGAT GTTTTCATCT GTAGAAAATG GCTCCAGCAA TGGCTCTGAT
CCAGAAGCTG CCAGAGCCAA AGCTGTAGAT AAGGTCAATA AGAAGGAAAT CATAGCGACT
AGCGACCATA TGACGGCTTA CTTCACTAAG AAAACTCCCG TGTACAAGGT CCATTTCACA
AGAAGAAACT TGTGTCTTGC TGGTGGAGCA TTCATGAGTT AG
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| Protein sequence | MAGDNNNSNA TNQPHELNPP TQTSSQPSQP SQAGSVRAPA NQTASQPAQP RGQQPSFSQA
DLNRIVLEYL NKKGYHRTES MLRLESSNTP TPAVTPVSPA TSSLASPGEI VSPANAARRE
KELKDKLNKN DREMRELKER QARVERELRE ARDREIRLVK EKELREIKDL EEKKKRENDP
DVYFTVYSML KKWVDTSLDL YKPELSRVLY PLFIHCFFEL ISKNFVDSGK RFFDKFKSDH
IILHGVEINQ LAGISLPEHL KENELALAYR RNKYKIVVSK TSMNLLLYFL HENEAVGGAI
LIRIINQYLD TVISSAKLDK VDQEGEANPE EGIPQYVAKT NEIDKFNEQS VKLGKFPIDP
EVQKEVEAEL KVKDERSSPV NGKTLVEEFA EMTKPETDSP AREALPLPLK DHADIKRMIL
DVEDSRSKIK LGALQASAPS VCMYTFHNTS NDMTCIDFNE DSNMIAAGFQ DSFIKLWSLD
GRPLKSVFKR DRYNSDNTRK LIGHSGPVYS VSFSPDNRYL LSGSEDKTVR LWSLDSYTAL
VSYKGHNQPI WDVKFSPLGH YFATASHDQT ARLWATDHIY PLRIFAGHIN DVDCVEFHPN
SNYVFTGSSD KTCRMWDVQT GNCVRVFMGH TGPVNCMAVS PDGRWLASAG EDSVVNIWDA
GTGRRLKTMK GHGRSSIYSL SFSRDGGVLV SGGADNTVRV WDVKRDTNDA GPEPEMFSSV
ENGSSNGSDP EAARAKAVDK VNKKEIIATS DHMTAYFTKK TPVYKVHFTR RNLCLAGGAF
MS
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