Gene PICST_64696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64696 
Symbol 
ID4841098 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp252719 
End bp253312 
Gene Length594 bp 
Protein Length159 aa 
Translation table12 
GC content40% 
IMG OID640392413 
Productpredicted protein 
Protein accessionXP_001386645 
Protein GI150866899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.102913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00265123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTCTGT GGTCTAGTTG GTTATGGCAT CTGCTTAACA CGCAGAACGT CCCCAGTTCG 
ATCCTGGGCA GAATCATTTT TTTGCTACGT AGATCCATTA ATTGTTCCAA TCAGCACGCT
AATTTGAATA TCTTGTGGAG ACTAGAAATT TAATTTGTAC AAGTACTTTT CTTACTTAAG
AACGGTAGAG TGAAAAGCTC CTTATTAATA CACCGAGAAG CATCAATGTT GGGGAAAGCA
GGAGGGTCTT CCCTAGGTAT GGCCAAAAAT CGCTGGCAAA ATAGCAGAAG ACTCTTCTCA
AGCACTTCTT TTCTTTTGCT GAAGGTATCC TTAACTTTCT TCACAAAAAA GACTTGCATG
CTATGTACAA ATGCCAGAGT CGTTTTAACG TCTACATTAG AGAATAATGC TCTCAAGACC
AAAGAAGTAG ATTTAAAGGT TATTGATATA ATGGAGCCGG AAAACTCTGA ATGGTTTGAC
AAGTACTGCT ATGATGTTCC AGTACTTCAC GTGGATCGCC CTGATCAGAA GAAGCCTGTC
AAGTTCATGC ACTATTTTTA CGAGGATAAG CTCGTAGAAG AGCTTACCAA GTAA
 
Protein sequence
MVSWSSWLWH SLNTQNVPSS ISGRIIFLLR RSINCSNQHA NLNIFINVGE SRRVFPSRRL 
FSSTSFLLSK VSLTFFTKKT CMLCTNARVV LTSTLENNAL KTKEVDLKVI DIMEPENSEW
FDKYCYDVPV LHVDRPDQKK PVKFMHYFYE DKLVEELTK