Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64663 |
Symbol | |
ID | 4840864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 355022 |
End bp | 355924 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392179 |
Product | predicted protein |
Protein accession | XP_001386461 |
Protein GI | 150866759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.82295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCT TTTTCAAAGC ACCTCTAGAC ATTGAGATTA GGCTAGACAA TGAAGATACA AGGAAACATG TCGATGTGAC GACTCCTCAC GGTCGAATGG AGAGACTACC AATATATAAA GACGGCGAAT CTGTCAAAGG AAGTGTTACT ATCAGAACAA AGGAGGGAAG AAAAGTAGAA CATCTTGGAG TTAAGGTACA ATTACTAGGA TGTATTGAAA CCAACTTGGA CGGCGTGATA TCATCTGAGT TCTTATCTTT AGCTACAGAA TTGGCTGCTC CTGCTATTTT ATCACACCCG GAAACATTTC CTTTTGAATT CAAGAATGTA GAGAAGCAGT ACGAAAGTTA CCGTGGTAAA AATGCAAGAT TGCGTTACTA CTTGAAGGTT GTATTTTCGA GAAAGTCTTC GTCAGATATC ACCAGAGAAA AGGAATTATG GGTATACCAG TATATTAATC CCCCAGTATC GACTACTACC AAGGATGGTC CCACTGTGAA AATGGATGTG GGGATCGAAG ACTGCTTGCA CATTGAGTTC GAGTACCTGA AGTCCAGGTT TTCACTCAAA GATGTGATTA TTGGTCGTAT ATATTTTTTG CTAGTCAGAC TAAAGATCAA GCATATGGAG TTGTCGTTGA TTAGGAGGGA GACTGTGGGA GCTCCTCCAA ACCAGATAAC CGATAGCGAG ACTGTTGTTC GGTTTGAGAT CATGGATGGT GCCCCAGTTA AGGGAGAAAC CATCCCCATC AGATTGTTCT TGGGTGGATT TGACTTGACG CCTACTTACA GAGACATAAA CAAGAAGTTT TCCGCAAGGA CGTACTTGTC GCTTGTTTTG ATCGATGAAG ATGCGAGAAG ATACTTCAAG CAGAGTGAGA TCATCTTGTA CAGAGACCAG TAG
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Protein sequence | MSIFFKAPLD IEIRLDNEDT RKHVDVTTPH GRMERLPIYK DGESVKGSVT IRTKEGRKVE HLGVKVQLLG CIETNLDGVI SSEFLSLATE LAAPAILSHP ETFPFEFKNV EKQYESYRGK NARLRYYLKV VFSRKSSSDI TREKELWVYQ YINPPVSTTT KDGPTVKMDV GIEDCLHIEF EYSKSRFSLK DVIIGRIYFL LVRLKIKHME LSLIRRETVG APPNQITDSE TVVRFEIMDG APVKGETIPI RLFLGGFDLT PTYRDINKKF SARTYLSLVL IDEDARRYFK QSEIILYRDQ
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