Gene PICST_64663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64663 
Symbol 
ID4840864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp355022 
End bp355924 
Gene Length903 bp 
Protein Length300 aa 
Translation table12 
GC content42% 
IMG OID640392179 
Productpredicted protein 
Protein accessionXP_001386461 
Protein GI150866759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.82295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCT TTTTCAAAGC ACCTCTAGAC ATTGAGATTA GGCTAGACAA TGAAGATACA 
AGGAAACATG TCGATGTGAC GACTCCTCAC GGTCGAATGG AGAGACTACC AATATATAAA
GACGGCGAAT CTGTCAAAGG AAGTGTTACT ATCAGAACAA AGGAGGGAAG AAAAGTAGAA
CATCTTGGAG TTAAGGTACA ATTACTAGGA TGTATTGAAA CCAACTTGGA CGGCGTGATA
TCATCTGAGT TCTTATCTTT AGCTACAGAA TTGGCTGCTC CTGCTATTTT ATCACACCCG
GAAACATTTC CTTTTGAATT CAAGAATGTA GAGAAGCAGT ACGAAAGTTA CCGTGGTAAA
AATGCAAGAT TGCGTTACTA CTTGAAGGTT GTATTTTCGA GAAAGTCTTC GTCAGATATC
ACCAGAGAAA AGGAATTATG GGTATACCAG TATATTAATC CCCCAGTATC GACTACTACC
AAGGATGGTC CCACTGTGAA AATGGATGTG GGGATCGAAG ACTGCTTGCA CATTGAGTTC
GAGTACCTGA AGTCCAGGTT TTCACTCAAA GATGTGATTA TTGGTCGTAT ATATTTTTTG
CTAGTCAGAC TAAAGATCAA GCATATGGAG TTGTCGTTGA TTAGGAGGGA GACTGTGGGA
GCTCCTCCAA ACCAGATAAC CGATAGCGAG ACTGTTGTTC GGTTTGAGAT CATGGATGGT
GCCCCAGTTA AGGGAGAAAC CATCCCCATC AGATTGTTCT TGGGTGGATT TGACTTGACG
CCTACTTACA GAGACATAAA CAAGAAGTTT TCCGCAAGGA CGTACTTGTC GCTTGTTTTG
ATCGATGAAG ATGCGAGAAG ATACTTCAAG CAGAGTGAGA TCATCTTGTA CAGAGACCAG
TAG
 
Protein sequence
MSIFFKAPLD IEIRLDNEDT RKHVDVTTPH GRMERLPIYK DGESVKGSVT IRTKEGRKVE 
HLGVKVQLLG CIETNLDGVI SSEFLSLATE LAAPAILSHP ETFPFEFKNV EKQYESYRGK
NARLRYYLKV VFSRKSSSDI TREKELWVYQ YINPPVSTTT KDGPTVKMDV GIEDCLHIEF
EYSKSRFSLK DVIIGRIYFL LVRLKIKHME LSLIRRETVG APPNQITDSE TVVRFEIMDG
APVKGETIPI RLFLGGFDLT PTYRDINKKF SARTYLSLVL IDEDARRYFK QSEIILYRDQ