Gene PICST_64516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64516 
Symbol 
ID4840858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp884886 
End bp886091 
Gene Length1206 bp 
Protein Length401 aa 
Translation table12 
GC content44% 
IMG OID640392173 
Productpredicted protein 
Protein accessionXP_001386586 
Protein GI150866855 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0239] Integral membrane protein possibly involved in chromosome condensation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.870632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC GAGAGTCTTC TAGCAGCCAG GTGGAAGAAT TCTCCGATCG TCACTCTTCT 
ATAGTCAACA GAAGGCGGTC TGTTGAGCAC CAGCTCCAAG AATTGGAAGC AATCTCGCTT
CATAACTCGC TTCCTGAAGG ATTCAATGCC GAAGAACAGG AGTATCCACA AGATGAGATA
CCATTCAACA AGCCCGACAA CTTGTTTCTA GTAAAAACAC ATAAGTACTT TCCGATAATA
CTAAACATAA CAAACGGTGC TATCTGGGGA GTGCTCGCAA GAAAAGGACT AATGCAATTA
ACCACCTATA ACGGCTCGTA CCTTAGTGGT GTGATATGGG CCAACTTTAC TGCCTGTATT
GCAATGGGGA TGGCTGTAGA TAGCTCTAAG GTATGGGATA TCTTGTTAGA CAAGCATTCA
CTGGAATATC CTACCAAAGC TTCCATACCT CTATATACTG GTATAACCAC AGGCTTCTGT
GGAACGCTTT CGTCATTTTC CTCGGTGATG TTGGAAGCTT TTAACAAGTC TGCGGACACG
GAAATCGGAG TGTTCTACCA TTACCCCAAC GCTGCCTATG GAATAATGGA GTTCTTTGCT
GTGAACATTG CCCAGTTCGG TTTGTCGATC ACGGGATTCC ATATTGGTAG ACATTTTGTG
GAGACTTTTG ACAAGGAAAT GCCGTCGTTC TCCAGAAGAA CCTACAAAAC ATTGGAAAAA
CTCTCCATGG CAGTAGGTGT GGCAGGATTA ATTATTACTA TTGTTTTATT AGGTGTACAA
GATAAGGGTA CCTGGAGGTC GTGGCTATTT GCCATATTCT TTGCTCCATT TGGAGCATTG
CTCAGATTTT ATCTCTCCAA GTACCTCAAT GCCAAAGTGA AAGACTTCCC ACTAGGAACT
TTTTCGGCCA ACTTCCTCGG AACGATTTTT CTTGCTATTT TCACACTATT AGGTAGAGGT
AAGTTGCCTG GTGGTGGACA GATCCTGAAA CATACTGTAG GGTGCCACGT CCTTAATGGG
CTCGATGATG GCTTCTGTGG CGCTTTGACT ACAGTGAGTA CATTTATTGT AGAGTTATTT
GGTCTCAGAA CTCTACACTC CTACAGATAT GGGGTTGTAT CAATTTTGGC CAGTTTTGCG
CTCATGCTAC TCATCTTGGG CTCCTACAAT TGGGCCGTGG GGCTTGCAGA TCCTATTTGC
TCGTGA
 
Protein sequence
MSERESSSSQ VEEFSDRHSS IVNRRRSVEH QLQELEAISL HNSLPEGFNA EEQEYPQDEI 
PFNKPDNLFL VKTHKYFPII LNITNGAIWG VLARKGLMQL TTYNGSYLSG VIWANFTACI
AMGMAVDSSK VWDILLDKHS SEYPTKASIP LYTGITTGFC GTLSSFSSVM LEAFNKSADT
EIGVFYHYPN AAYGIMEFFA VNIAQFGLSI TGFHIGRHFV ETFDKEMPSF SRRTYKTLEK
LSMAVGVAGL IITIVLLGVQ DKGTWRSWLF AIFFAPFGAL LRFYLSKYLN AKVKDFPLGT
FSANFLGTIF LAIFTLLGRG KLPGGGQISK HTVGCHVLNG LDDGFCGALT TVSTFIVELF
GLRTLHSYRY GVVSILASFA LMLLILGSYN WAVGLADPIC S