Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64341 |
Symbol | RHB1 |
ID | 4840838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 133600 |
End bp | 134148 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640392153 |
Product | GTP-binding protein of the ras family |
Protein accession | XP_001386625 |
Protein GI | 150866883 |
COG category | [R] General function prediction only |
COG ID | [COG1100] GTPase SAR1 and related small G proteins |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGG CTCGTAAGAT AGCCGTGGTT GGCTCCCGAT CCGTAGGAAA GTCTTCAATG ACGGTTCGTT TTGTCGAAGA CCATTTTGTC GAGTCATACT ATCCAACCAT AGAGAACCAG TTTCTGAAAA CGATCAACTA CAAGAACCAA GACTACGCCA TAGAAATTTT GGATACGGCG GGCCAGGACG AGTTTCTGAT AATGAACGAG AAACATCTAA TCGGTATTCA TGGCTATTTG TTGGTTTACT CTGTGACACT GCGTCAATCA TTTGAATTGA TTTCTGTCAT CAGAGACAAG ATCCTTAACT CCATTGGCAC TGATGCAATT CCTATGGTTC TCATAGGAAA CAAATGCGAT TTGAACTACC AGAGACAAGT AGACACAGTA GAAGGGCAGC AGTTGGCCAA GACGTTTGGA TGTAAATTCT TGGAGAGTTC GGTTCGTGAA AATATCAACA TCAACCAGGC GTTTGAAAAC TTGATTGACG AAATCGAAGT TATCCAGAAC CCTCCAGCCA AACAAGAAGA ACGATGCTCG ATCATGTAA
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Protein sequence | MVKARKIAVV GSRSVGKSSM TVRFVEDHFV ESYYPTIENQ FSKTINYKNQ DYAIEILDTA GQDEFSIMNE KHLIGIHGYL LVYSVTSRQS FELISVIRDK ILNSIGTDAI PMVLIGNKCD LNYQRQVDTV EGQQLAKTFG CKFLESSVRE NININQAFEN LIDEIEVIQN PPAKQEERCS IM
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