Gene PICST_64341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64341 
SymbolRHB1 
ID4840838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp133600 
End bp134148 
Gene Length549 bp 
Protein Length182 aa 
Translation table12 
GC content43% 
IMG OID640392153 
ProductGTP-binding protein of the ras family 
Protein accessionXP_001386625 
Protein GI150866883 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGG CTCGTAAGAT AGCCGTGGTT GGCTCCCGAT CCGTAGGAAA GTCTTCAATG 
ACGGTTCGTT TTGTCGAAGA CCATTTTGTC GAGTCATACT ATCCAACCAT AGAGAACCAG
TTTCTGAAAA CGATCAACTA CAAGAACCAA GACTACGCCA TAGAAATTTT GGATACGGCG
GGCCAGGACG AGTTTCTGAT AATGAACGAG AAACATCTAA TCGGTATTCA TGGCTATTTG
TTGGTTTACT CTGTGACACT GCGTCAATCA TTTGAATTGA TTTCTGTCAT CAGAGACAAG
ATCCTTAACT CCATTGGCAC TGATGCAATT CCTATGGTTC TCATAGGAAA CAAATGCGAT
TTGAACTACC AGAGACAAGT AGACACAGTA GAAGGGCAGC AGTTGGCCAA GACGTTTGGA
TGTAAATTCT TGGAGAGTTC GGTTCGTGAA AATATCAACA TCAACCAGGC GTTTGAAAAC
TTGATTGACG AAATCGAAGT TATCCAGAAC CCTCCAGCCA AACAAGAAGA ACGATGCTCG
ATCATGTAA
 
Protein sequence
MVKARKIAVV GSRSVGKSSM TVRFVEDHFV ESYYPTIENQ FSKTINYKNQ DYAIEILDTA 
GQDEFSIMNE KHLIGIHGYL LVYSVTSRQS FELISVIRDK ILNSIGTDAI PMVLIGNKCD
LNYQRQVDTV EGQQLAKTFG CKFLESSVRE NININQAFEN LIDEIEVIQN PPAKQEERCS
IM