Gene PICST_64180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64180 
SymbolARP10 
ID4841114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp929655 
End bp930890 
Gene Length1236 bp 
Protein Length411 aa 
Translation table12 
GC content40% 
IMG OID640392429 
ProductActin-like protein (Actin-related protein 2) 
Protein accessionXP_001386597 
Protein GI150866863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGC AGTCTGGACC TAATGAGTAT TCGGTAGTGA TAGTATCTTT GGAAGAACGT 
TCTGTAAGCG TCGAACGAGC GGGAGTTGTT TCTCCAATCA CAGTCCGTTG GACGAATAGC
AACCGTACAA ATTCATCGGT GTTGCAATTT CCTTCATTTT TGGAGTTGTC GGATGCCTCA
CTCAATAAAG AGGAGACTGA AGAACTTCTT AGAAATACCT TGGAAACGAA GCACAGTAAA
CTTGCAGAAA TTTACACTTC GGAATTGTTC CGTTGGTGCG ATTTCAATCG TAGAGGAGGT
ATCAATGAAG TCGAAGAAAG GCTAATCCAT TCATTGCTTG TTGATGTTTG TATAGAACAA
TTGGGGGTTT CTCCTCGCGA ATGCAAAGTT GTATTTATAG ACGATGGATT TTCAGAAGTT
TTCAAATTCC AAATGATCGA TATTTTGCTT TCAAAGCTAA AGTTCAGATC GGTTATAGTA
CAGGCCCTGC CAGTTTTGGC GATTATAGGC TCAAATCGTG ATAGTGGAAT TGTGGTCGAT
ATTGGATGGA GCAATTGTAG AATTGTGCCA GTCATAGATC TTCGAGACCT CACTGTTAAT
GGACGGTACC AATACCCCCG AAAATGGAAT GGTCTAACGC TTCATTATAC TATTGTTGAG
AAGCTAATAG AGCTTGATGA CAGAATGGTA AATGAGAAAT TGCTATCAAG AAACGATTTA
TTTGATATAA TCGCGAATTT TATTGAGAAA TACATCTATG TCAGACCCAT TGAGGCCCAG
CCTCGAATTT TGGCAGAATC ATTTGAGATT GTGGAAGGTG TCTTTCTACC CAACAAGTGG
AGATACGAGA TCATAGAAGA GATGTTTTTT GGAAAGGAGT TGATTTCTCA GCAGATTTCT
TCGCTTGTTA AGAGCGCGCA TATTGACAAC AGAAAAGTCT TGCTAAAGAA TATTATACTT
AAAGGGGTAA TAGCGGAGAT AGCAGGATTC AAGACCAGGT TGATTCAGGA ATTGAACAAA
GAAGTAAATG GTACTGCTTG CGGAAAAGTC ACGCTTGGTT CGTGGAGTGG ATGTTCCACA
TATGTCTCAA GTGTGTTGTC AAAACAAGAC AAAGCTTCTT GGAAACATTT GGAGATCACC
AGGGAAGCTT TTGCAGGTGT CTCTGGTCCA AATGGCTACA GGCTTACAGG CTTGTTAGGT
AGCAGAAATG GTAATATAGT GAACATTGAT ATATAG
 
Protein sequence
MYQQSGPNEY SVVIVSLEER SVSVERAGVV SPITVRWTNS NRTNSSVLQF PSFLELSDAS 
LNKEETEELL RNTLETKHSK LAEIYTSELF RWCDFNRRGG INEVEERLIH SLLVDVCIEQ
LGVSPRECKV VFIDDGFSEV FKFQMIDILL SKLKFRSVIV QASPVLAIIG SNRDSGIVVD
IGWSNCRIVP VIDLRDLTVN GRYQYPRKWN GLTLHYTIVE KLIELDDRMV NEKLLSRNDL
FDIIANFIEK YIYVRPIEAQ PRILAESFEI VEGVFLPNKW RYEIIEEMFF GKELISQQIS
SLVKSAHIDN RKVLLKNIIL KGVIAEIAGF KTRLIQELNK EVNGTACGKV TLGSWSGCST
YVSSVLSKQD KASWKHLEIT REAFAGVSGP NGYRLTGLLG SRNGNIVNID I