Gene PICST_64139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64139 
Symbol 
ID4840909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp675057 
End bp676058 
Gene Length1002 bp 
Protein Length333 aa 
Translation table12 
GC content39% 
IMG OID640392224 
Productpredicted protein 
Protein accessionXP_001386722 
Protein GI150866951 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5160] Protease, Ulp1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.212893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0727802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAGTATGGAA CAAGCTTGTC GCTTTCCAAC AACTATCTCA AATCTTCTTC GTACCAGAAA 
GAGTATACTC CAGAACCAAA TTTTGAAGGT GTGAAACGGG AACGAATCAA ACTAAGTGAC
TACAGTCAGT TCATCAAACA GGAACCCCAG ATATCTGAGT ACAAGAAATC TATTCTCAAC
TACTACATTC CTTCGCTGCC TGTTTCTATC ACAAACTATT CTATTGTGGA TAAACTAATA
CCACATTACT ATGTGGACAA GATTTCGGCC GAATACGACC GGAAACGCAT AGACAATCAG
AAAATTATCG AGAAAAGTAG ACTTGATTCT CTCTCCAAGA TAACCCCACT TGGACCCCAA
GAGTTGCAGA AAGTACAGGC AGTATGGCAA AGTAGCAGAA CAGACACTTT CGCTACCAAT
TACCAGATCG AGTTGTATTT TCACGATCTC AAGACCCTTA GAGATGGTAA ATGGCTCAAC
GATAACATAA TAGACTATTA CCTCAATCTC ATCATGGAAT CTCAAAACCA AAAGGTATTT
GGATGGACCA CTCATTTTTA CACAACTTTG GAAACAAAAG GATACCTGGG AGTAGCTAGA
TGGGCCAAGA GGAAGAAAAT CAATTTGTTT GAAAAGAAAA AGATTTTGGT ACCCATCAAT
ATCTTGAATA CTCATTGGGC TCTAGCTGTC ATAGATAACG TTGACAAGTC TATCAGGTAC
TATGATTCGC TCTCTAGTTC TGGAAATGAG AATGCCATGC TCAACTTGAA GGACTATATG
AAACAAGAAG CTTCAAGATT GAATGTGCCA GTAATAGACT ATGAATTGTA TCCTCATATG
GAAACCCCCC AACAAGCGAA TGGTTATGAC TGTGGAGTTT TCACTTGTAC GGCTGCTAAA
TACATTGCAT TATCTAAGTC TCTAACCTAC TCTCAAAAAG ATATGAAGGT TATCAGACGC
AGAATGACTT ACGAAATCAT CTCTAGCCGA TTATTGGATT AA
 
Protein sequence
QYGTSLSLSN NYLKSSSYQK EYTPEPNFEG VKRERIKLSD YSQFIKQEPQ ISEYKKSILN 
YYIPSSPVSI TNYSIVDKLI PHYYVDKISA EYDRKRIDNQ KIIEKSRLDS LSKITPLGPQ
ELQKVQAVWQ SSRTDTFATN YQIELYFHDL KTLRDGKWLN DNIIDYYLNL IMESQNQKVF
GWTTHFYTTL ETKGYSGVAR WAKRKKINLF EKKKILVPIN ILNTHWALAV IDNVDKSIRY
YDSLSSSGNE NAMLNLKDYM KQEASRLNVP VIDYELYPHM ETPQQANGYD CGVFTCTAAK
YIALSKSLTY SQKDMKVIRR RMTYEIISSR LLD