Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64139 |
Symbol | |
ID | 4840909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 675057 |
End bp | 676058 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640392224 |
Product | predicted protein |
Protein accession | XP_001386722 |
Protein GI | 150866951 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5160] Protease, Ulp1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.212893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0727802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAGTATGGAA CAAGCTTGTC GCTTTCCAAC AACTATCTCA AATCTTCTTC GTACCAGAAA GAGTATACTC CAGAACCAAA TTTTGAAGGT GTGAAACGGG AACGAATCAA ACTAAGTGAC TACAGTCAGT TCATCAAACA GGAACCCCAG ATATCTGAGT ACAAGAAATC TATTCTCAAC TACTACATTC CTTCGCTGCC TGTTTCTATC ACAAACTATT CTATTGTGGA TAAACTAATA CCACATTACT ATGTGGACAA GATTTCGGCC GAATACGACC GGAAACGCAT AGACAATCAG AAAATTATCG AGAAAAGTAG ACTTGATTCT CTCTCCAAGA TAACCCCACT TGGACCCCAA GAGTTGCAGA AAGTACAGGC AGTATGGCAA AGTAGCAGAA CAGACACTTT CGCTACCAAT TACCAGATCG AGTTGTATTT TCACGATCTC AAGACCCTTA GAGATGGTAA ATGGCTCAAC GATAACATAA TAGACTATTA CCTCAATCTC ATCATGGAAT CTCAAAACCA AAAGGTATTT GGATGGACCA CTCATTTTTA CACAACTTTG GAAACAAAAG GATACCTGGG AGTAGCTAGA TGGGCCAAGA GGAAGAAAAT CAATTTGTTT GAAAAGAAAA AGATTTTGGT ACCCATCAAT ATCTTGAATA CTCATTGGGC TCTAGCTGTC ATAGATAACG TTGACAAGTC TATCAGGTAC TATGATTCGC TCTCTAGTTC TGGAAATGAG AATGCCATGC TCAACTTGAA GGACTATATG AAACAAGAAG CTTCAAGATT GAATGTGCCA GTAATAGACT ATGAATTGTA TCCTCATATG GAAACCCCCC AACAAGCGAA TGGTTATGAC TGTGGAGTTT TCACTTGTAC GGCTGCTAAA TACATTGCAT TATCTAAGTC TCTAACCTAC TCTCAAAAAG ATATGAAGGT TATCAGACGC AGAATGACTT ACGAAATCAT CTCTAGCCGA TTATTGGATT AA
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Protein sequence | QYGTSLSLSN NYLKSSSYQK EYTPEPNFEG VKRERIKLSD YSQFIKQEPQ ISEYKKSILN YYIPSSPVSI TNYSIVDKLI PHYYVDKISA EYDRKRIDNQ KIIEKSRLDS LSKITPLGPQ ELQKVQAVWQ SSRTDTFATN YQIELYFHDL KTLRDGKWLN DNIIDYYLNL IMESQNQKVF GWTTHFYTTL ETKGYSGVAR WAKRKKINLF EKKKILVPIN ILNTHWALAV IDNVDKSIRY YDSLSSSGNE NAMLNLKDYM KQEASRLNVP VIDYELYPHM ETPQQANGYD CGVFTCTAAK YIALSKSLTY SQKDMKVIRR RMTYEIISSR LLD
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