| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64024 |
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| Symbol | SGD1 |
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| ID | 4840907 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 666876 |
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| End bp | 669890 |
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| Gene Length | 3015 bp |
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| Protein Length | 988 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640392222 |
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| Product | suppressor of glycerol defect |
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| Protein accession | XP_001386721 |
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| Protein GI | 150866950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.109115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGGA GGAGAAACAA TAACGAAGAA AACGAAGAGG AGAGAGGAAT TCCTTCAAAA
CTTTTACAGC AGATACAAAC AAAGGAGGAC AAAGGTGACT ACAACGATGA GGATAGATTT
ACAAAGTTCA ACTCCAAGAA GAGAAAGGAA AAGCCTTTGT CAAGAAAAGA CAGAAGACAG
CAAGAAAGAC AACTAAAGAA ACAAAAGAAA AACACCAAGC CAATTAATAA CGAAGCCAAA
AGGAAAGCAA TCACAAACAA TAATAGTAAA AGCATCAAGA CTAGCCAGAA ACCAGTTAAG
TCTCAAACGA AAGAAGATTC TCGCGCAGAC TTTAAGGCAT TGAAGACTAA CAGGGCGCAA
ACTTCAACAA AAACTATAGA TGATCCTGTG GAGCAACTCA GATTGTTGAA AGAAAAGAAA
AAAGGATCTC AGCCAAATGA ATTCAGAGTT GTCAAAGCTG ACGAACTCCT GGAAGATTCT
GACGGAGACG ACAACTTCGA TGATTTCGAC AATCTGGATG ATTTCGACGA TTATGATGAT
GAAGTAGAAG AAAATCCATT GGAAGTTTTA AAAAAGTTGA AGGAGGTGAA GAAAGGTTCC
AAGAACAAAT CTGAAGTAAG AGTCATCAAG TTGGACGAAT TGCTGGACGA TGAACTTTCG
GAAGATGTTT CGGAAGATGA ACTTTCGGAA GATGAAGAAG AAGATGAAAA CGAAGACATA
GATGACAATG ATTCTAATGT GAAAGACAAT TTCGATGGCT TTGACGAAGA AGAGAATGAA
GACTCTGAGG ATGGCTTCAT CGTAGACGAC GATAACATAG ATGCAGATGA CTTTGATAGC
TTTGATGAAG AGGAAATTTT GGAAGAAGAG GAAGATCCTT TAGCCAAATT GAAGGCATTG
AAGGAACAAA AGAGAAATGT AAAGAAGGAT AATAAACCAT CTAAAGAAGT CAAGAATTCC
AGAGTGATCA GTCAACATGA ATTAGAGCTC ATGAAAAGAG ATGAAAATGA TATGGAATTC
TATGCTAAGA AGCTCGGTTT GAAGAACGGT AAAAAATCAA AAATTGCCAA AACAGACGAT
GATGACATTA TTGGAGGATT ATTAGACGGA TTGGACTTTG ATTTCGAAGA AGAAATGGAA
CCACTGGAAG AAGAAGCTGA TGATTTCGAT GAAGGGGAAG AAGAAAATTA TTCTGGTGAT
GATTTTGATG ATGATGAAGA GGACGCACCA AAGAAGGAAA ATCCTTATGT AGCCCCTATT
CAAAATAAGA CTTCGGATGA GGTGTCAGAC TCAAGTAATC ATGCTGCTGG TTCATATATC
CCACCAGCAT TGCGTAGAAA GATGGCATTA GAAGGGGGTA ATGTTTCTGA AGAGATTCTC
AACTTGAGAA AAGCCATCAA GGGTCCTTTG AACAAGTTGT CTGAGTCCAA TATCAGCAGC
ATTGTCAATG AAATCAATAC ATTGTATTTA TCGAACTCAA GAAATTCGGT AAATAATGAG
TTGACTACTA TCGTGATGGA CAGTATCATT CAACAGGGAA GATTGTTGGA TACCTTTGTA
TACTTACACG CAACACTTGT CGTTGCTATC TACCGTTTGC AGGGCGTCGA ATTTGGTGCT
CACTTCATTC AGTCAATGAT TGAAAAATTT GAAAGCTATC ATAAGGAAAC CGGAAAAGGA
AAAGAAGCTT CTAATATGAT ATCACTCTTA TCTTCGGTTT ATCAATTTCA GTTGGTATCA
TCTAAATTAT TGTACGATGT GATCAAGGTT TTGATAAACG AATTAAATGA AAACAACGCT
GAACTCTTGC TCAGATTGAT CAGAAATTCA GGTAACCAAA TGAGGTCTGA CGATCCTTCT
GCCTTGAAAG ATATTGTAAT TCTTTTGAAT GATGCCAAAT CATCCATTCC ACAGTCCCAG
ATGAGTACAA GAACACAATT CTTGGTTGAA ACAATTACTT CACTTAAGAA CAACAAACTT
AAGATCAACA ATGAATCCAG TCACCAGCTC GCTATCAGAT TGAAGAAATT CTTAGCAACA
ATCAACAACA ACAAATTCAA CGATCCAATA CAAGTTTCTC TCAATGATAT CCACAGCATT
GCTTCGAAAG GGAAGTGGTG GTTAGTTGGT GCTGCTTGGA AAGGTAGTGA TGGAGATGAC
AAAAATGCAG AGCCTGACCT CAACAGAGAT GCTATCAATG ATATATTAGA CAACTCTGAA
CCTAATTGGA TGGACTTAGC TAGATCTCAG CGTATGAACA CTGATATCAG AAGAGCTATT
TTCATATCCA TCATGTCAGC AAATGATTAC ATTGATGCAT TAACTAAGTT GGACAAGTTG
GCTTTGAAAC GTTCTCAAGA TAGAGAAATT CCTCGTGTAT TGATACATTG TACAAGTGTT
GAGCCAGCGT ATAATCCTTA CTATGGAATC TTAGCAAGCA AGCTTTGTGA GGATCACAGG
TATAGAAAGA CTTTCCAATT CATGCTCTGG GATCTTATTA AAGAATTCGA AGGTTCCACT
TCTGACGAAG ATGAAGATTT TGTTGGGTTC GATCATGGTG ATGATGACGA TGAAACCAAG
TTGAAGAGAA TCTTGAATTT GGGTCGATTT TTCGGATTTC TCTTGGCGGA AGGCTCTTTG
CCTTTGCACT TGCTTAGAAC TGTTAACTTC TTAACTGCTG CTAGTGACAC TATCTTGTTC
ATGGAAGTTG TTTTTGTTAG CTTTTTGGAT AATATCGGGA AGAAGTCACA GATCAATTCA
GTGGGAGCTG GTCTCGGTAA AAGATCGAAG AATATGTATG AACAAAAGTT CGATGACAGG
TTATTAATAG AGAGGGTGAT CAAAGCCCAG GAACAGATGA CTTTGCTCAG AGGAATTCAA
TTCTTCTTAC AGGACAAGGT TAGAAAAAGT GATATTATCT CTGGTAAGAA GCAGACCAGA
AGAGTTGAGT GGGGAATAAA TGCTATGGTA GATATCATAG AGGAATTTGT GAGATCTAAC
GACGATAAGA ACTAG
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| Protein sequence | MNRRRNNNEE NEEERGIPSK LLQQIQTKED KGDYNDEDRF TKFNSKKRKE KPLSRKDRRQ
QERQLKKQKK NTKPINNEAK RKAITNNNKD SRADFKALKT NRAQTSTKTI DDPVEQLRLL
KEKKKGSQPN EFRVVKADEL SEDSDGDDNF DDFDNSDDFD DYDDEVEENP LEVLKKLKEV
KKGSKNKSEV RVIKLDELSD DELSEDVSED ELSEDEEEDE NEDIDDNDSN VKDNFDGFDE
EENEDSEDGF IVDDDNIDAD DFDSFDEEEI LEEEEDPLAK LKALKEQKRN VKKDNKPSKE
VKNSRVISQH ELELMKRDEN DMEFYAKKLG LKNGKKSKIA KTDDDDIIGG LLDGLDFDFE
EEMEPSEEEA DDFDEGEEEN YSGDDFDDDE EDAPKKENPY VAPIQNKTSD EVSDSSNHAA
GSYIPPALRR KMALEGGNVS EEILNLRKAI KGPLNKLSES NISSIVNEIN TLYLSNSRNS
VNNELTTIVM DSIIQQGRLL DTFVYLHATL VVAIYRLQGV EFGAHFIQSM IEKFESYHKE
TGKGKEASNM ISLLSSVYQF QLVSSKLLYD VIKVLINELN ENNAELLLRL IRNSGNQMRS
DDPSALKDIV ILLNDAKSSI PQSQMSTRTQ FLVETITSLK NNKLKINNES SHQLAIRLKK
FLATINNNKF NDPIQVSLND IHSIASKGKW WLVGAAWKGS DGDDKNAEPD LNRDAINDIL
DNSEPNWMDL ARSQRMNTDI RRAIFISIMS ANDYIDALTK LDKLALKRSQ DREIPRVLIH
CTSVEPAYNP YYGILASKLC EDHRYRKTFQ FMLWDLIKEF EGSTSDEDED FVGFDHGDDD
DETKLKRILN LGRFFGFLLA EGSLPLHLLR TVNFLTAASD TILFMEVVFV SFLDNIGKKS
QINSVGAGLG KRSKNMYEQK FDDRLLIERV IKAQEQMTLL RGIQFFLQDK VRKSDIISGK
KQTRRVEWGI NAMVDIIEEF VRSNDDKN
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