| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63965 |
|---|
| Symbol | |
|---|
| ID | 4841014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 797710 |
|---|
| End bp | 799146 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640392329 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386745 |
|---|
| Protein GI | 150866965 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.954213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCG AGGGTTTGGA AAAGAAGATA GAGGTGATCT CTATAAACGA CTCAGTTCCT
CAGGAAACGG GGCCAGTGGT TCCTCATGAG AGACAAGTTG TAGATGCAAT CATTGCGATC
TGGAAAGAAG ATCCAACCAC AGAATCATTG GGAATACCGA AGTTACATGC CATTGTCAAA
AACAAGTATC CAAACTGGTC TGTTTCAGAA AAAAGAGTGA AGACTTTATT GAAAAAGTTT
GGTCTTACTC CCAATACGAA CACGGAACAA TTCACCTATG CCAGTGATAT CACTTCAGAG
GATACCCCAC ATATCCAGTT ACCAGCCAAG ATCCAAATCG TCATGACTTC AAAGAGAGGT
AAGGGTTTAT ATGCCAAACA TAAAATTGCC AAAGGTGAGT TGATCTGGGA AGAAACTCCT
TTATTTTTCA TTCCTCCTTT GGCCAACATC AACTTGGTTA AGACAGGCAA GGCTTGTTCT
CACTGTGGAA AGCTTTTACA AACTACTACT GGTAGCTCAA TGTTGAAGGG ATTGGATTGC
AATGTTTGTC CAGAAGTTTG GTGTTCACAG CAGTGTAAGA AGCTCGATAG TGCAATTCAT
GGATTGCTCA AACATAATGT CTACAATCCT AATAAGAGAT TGACTTCCTC CAAAATTATT
GACTCGGAGT CATTTTTGGA ACTTCAAGAG TACTGTTTGA AAGAACTGTG GAATGCATTA
TATGCCATCG CTCTCATCTA TGCCAACATC TTATTGGACA AGACTGGAGT CAAGGAGAAA
CAGTTCCGAG CCATGGCAAG AGTTTCGCAA GATATAAGAT ACAAAGCATT GAACTCATCT
GCGGGAGCAT TCGACACTTT ACTGGGCGGT GCTTTGTTTG TACAAGAACA GCAGGAGACC
TTATGGAGAG AAGGGTTTGA AAAGTTCATT CGAGTTTTCC CAACATCAAC CTCTAAGCTC
ACTTACAAGG AGTTCTTGTT CATGATGGGT ACCTACAACA TCAACAACTT GGACTCATGC
ATTTTCCTCA CGCAATCGCA CTTGAACCAC AACTGTGACC CCAACACTAA TGTAGACACT
TCGCCTGTCA GAACCGAGGG ATTAAAGGTA TACGCTGCCA GAGACATTAG AGCTGGCGAA
GAATTGACCA CTACATATGT CAACCCGGCT CATACCGTTC AACAGAGGCA GAGAGAGTTG
AGAGTTAACT GGGGGTTTAT CTGCGGATGT CAGAAGTGTA AGGAGGACGT GAAGATCCAG
CACAGAAGAA AGTCTTCCAC TGTTCCTGCT GCCTCCAAGA GTGAAATCAG AGACATGTTG
AAGGCTGCTG AGAATCACGT AGGAGAAGAA GGCATTGAGT TGACTCCTCC AGAAGTAAGT
GGCGAGAGAA GAAAGTCGGT GAGATTCGAC GAAAAGGTGA TTGCCGTACA AGAATAG
|
|---|
| Protein sequence | MTAEGLEKKI EVISINDSVP QETGPVVPHE RQVVDAIIAI WKEDPTTESL GIPKLHAIVK
NKYPNWSVSE KRVKTLLKKF GLTPNTNTEQ FTYASDITSE DTPHIQLPAK IQIVMTSKRG
KGLYAKHKIA KGELIWEETP LFFIPPLANI NLVKTGKACS HCGKLLQTTT GSSMLKGLDC
NVCPEVWCSQ QCKKLDSAIH GLLKHNVYNP NKRLTSSKII DSESFLELQE YCLKESWNAL
YAIALIYANI LLDKTGVKEK QFRAMARVSQ DIRYKALNSS AGAFDTLSGG ALFVQEQQET
LWREGFEKFI RVFPTSTSKL TYKEFLFMMG TYNINNLDSC IFLTQSHLNH NCDPNTNVDT
SPVRTEGLKV YAARDIRAGE ELTTTYVNPA HTVQQRQREL RVNWGFICGC QKCKEDVKIQ
HRRKSSTVPA ASKSEIRDML KAAENHVGEE GIELTPPEVS GERRKSVRFD EKVIAVQE
|
|---|
| |