Gene PICST_63964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63964 
Symbol 
ID4841009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp783890 
End bp784510 
Gene Length621 bp 
Protein Length206 aa 
Translation table12 
GC content40% 
IMG OID640392324 
Productpredicted protein 
Protein accessionXP_001386563 
Protein GI150866835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.85296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.825519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA TAGATAGGCT TCTTTCTGTA GAAGAGTCTT CGTTAGTCAA AGATCAAGAG 
ATTGAACGGG TTCTTTCTTG TTCTGAATGG GATTATTTCG CTATACTTGA TGTTGATCCC
AGCAAGCACG AACCTGAGGC TATACCGAAT GTAGTGAAGA AAATATATAG AAAGAAGTCA
TTGCTTATCC ATCCTGACAG GACGAACAAT TCAAAAGCAC CAGAAGCATT TGATAAGTTG
AAAAAGGCAG AGTTGGTTCT TGGGACTTCT CTAGATGGGG AATCTGATAA TAACCTAGTC
GCAGAGAAGA GAAGGCTCAT GGATATATAT ATCGATGTAC AGAAGAAGCT GCAACAACAA
GAATTGACTG AGGTAAGATT GGAAGTGGCT TCTATATTAA AGGAAGAAGT AAATAACGAA
AACATCGACA AGTTATACAA GCAGAGACAA GAAGCCAGCA AACAAGCAGA GCTACAACGG
GCACAAGAGT CGAGAAAGAT GCGGAAGAAG CTCGAGGAAA AATGGGAGGA CGACAGAGAT
GCCAGAGTGA GCAATTGGCG AAAGTATACA CGTAAGGTTG AAAAGAGTAA GAAGAAGATA
AAGAAGAAGC TATTAGCCTG A
 
Protein sequence
MSDIDRLLSV EESSLVKDQE IERVLSCSEW DYFAILDVDP SKHEPEAIPN VVKKIYRKKS 
LLIHPDRTNN SKAPEAFDKL KKAELVLGTS LDGESDNNLV AEKRRLMDIY IDVQKKSQQQ
ELTEVRLEVA SILKEEVNNE NIDKLYKQRQ EASKQAELQR AQESRKMRKK LEEKWEDDRD
ARVSNWRKYT RKVEKSKKKI KKKLLA