| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63917 |
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| Symbol | CDC27 |
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| ID | 4840965 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 721764 |
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| End bp | 723950 |
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| Gene Length | 2187 bp |
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| Protein Length | 571 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392280 |
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| Product | Anaphase promoting complex subunit CDC27 (Cell division control protein 27) (Anaphase promoting complex subunit 3) |
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| Protein accession | XP_001386546 |
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| Protein GI | 150866823 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG ATACAGAGCT GTTTCCAGAG CCAGCAGAGT CGGCGTTCGT AATGCAGCAT
TTGCGCTCCA TCATTATCCA TTCGTTGGAC TCGTTTAACT TCGCCAACGC AGAGTTTGCC
TGTGAACGTC TCTTGGCCAT GGACTTGGAG AACTTGGACT CAACATACTT GTACAACTTG
ACGCTTTTCC GTCAGGGCAA GTACAAATCG TGCTACGCTA AAATGATCAA CTCCGATGCC
TGCGAACATT TGGGCTGTGT GTTCATCTTG GGTCAGTGCT GCTTGAAGCT CCAAAGATAC
AAAGAGGGTA TCTACCATTT GTTGAAGTTG AACTATCTCT ACAACGAGTC TAGCTTAGAA
GAGGGCATGA ATACAGACAG CCTGTATGAT CCATTTTTCT TTGTCACTCC GTCGCAGAAA
TACCACTACG AATTCAGAAG AAAAATCATG CCGGACTCCT CGATGATATA CCACTTGCTA
GGAGACTTGT ACCGAGGGAT GAATGACGTC AAGAACAGTG CCCTCAATTA TGCTCAGGCA
CTCAAGTTCA ACCAGTACGA TTTCGAGGCA TTTCAGGAAC TATGCAAACT CGGAGTCAAC
GTACGAGCCA AGGCTATCTA TAAGACAAAC AGTCAACTTG TTCAGGCTAT CAATAATAGA
AATAGCGGTG ATAATGATGA TTTTTCAAAC ACTTTTAATG ACTTACATGA CATATCCAAT
CCGTTTGCCA GTACCACAAG CGGTGCAAAT GGCAAACCTA TCTCGGTAAA CGAGACTCCC
ATAATACACC AGGATGATAC GTTTGGCTCT CTTTCGACTC CACGAATCAA ACCTACTGGA
GTACCAGATG CCCCACTACG TAAATCGAAT ATCAATACTT CTCATAGCGG AACTTCTCAT
TTTGAGTTTA CAAAACCGTC TTTCCCATCA GATACAACAG CAGACAAGAA GCCAAGACGC
GAGGGCGCAT ATTCACGGAT AACGTCACGG TTAATATCAC AACCTAGTGG TTCTGCTTCA
GACCCAACTG TGGGTTCTTC TGGCAAAGAT ACTCCTGCAA AGAAGTCTGT AGGCTCAAGA
GGTAGTCTAA AGAGAAACAC CTCAACATCG TTAATGCCCA ACGAAGTTGG ATCGAGTTCT
GCGGGTGCTG GAGTCGGAGC AGGTAGCAAG CCGTCAATTC TTGTTAATAA GGAAATCGAG
AAAAGTGATA AGTACTTGTA CAAATTGTAC ATAATCTTTG CAAAGAGTTT CAAAAGCATG
AGTAAGTACG ATTGTTACAA GGCTATCAGA TTGTTAGTGT TATTGCCTGA GAGAGAGAAG
GAGACACCAT GGGTGTTGAG TAAGCTAGGT CGTTTGCACT TCGAGATTGT TAACTACAAA
CAGTCTGAAT ACTACTTTAT CAAGTTGAGA AAGTTGGACC GAACAAGACT AGAAGATATG
GAGTACTACT CCACACTTTT GTGGCATTTG CATAGAAAAG TAGAGTTGAC CTATTTGGCG
AACGAATTGC ATGATTTGGA TACCGAATCT CCAATTACAT GGTGTACCAT TGGTAACTTA
CTCTCTTTAA CCAGAGAACC CGATGAGGCA ATCAAGTGTT TCAACAAAGC CATCAAGTTG
GATGATAGTT TCACCTATGC CTATACATTG AAGGGACACG AATACTTTGG AAATGACAAC
TACGAAATGG CGCTCGAGAA CTTCCGCATG AGTTTGTTGA TAGATTCAAG ACACTACAAT
GCCTTATACG GTATTGGCAT GGTGTATATC AACCTCGGGG ACTATCAGAA AGCCGACTAT
CATTTCCGCA AGGCAGTATC CATCAATCCC ATTAATATTA TCTTAATATG CTGTGTTGGT
ATGGTACTCG AAAAGTTGAA CAAGAAGCAC TTGGCATTGA GGCAATATGA ACTTGCGAAT
AAATTGCAGC CAACCAATCC ATTGCCTATT TTTAAGATGG CTCAGTTGCT ATTCTCGATG
CAGCAGTATC CACAGGCATT GAAGTACTTT GAGATCTTGA AGGATTTGGC ACCGGACGAA
GCTTCGGTTC ATTTCCTTTT GGGACAACTC TACAACGTCC AAAACGACAA GTTCCTGGCC
ATACGCGAGT TTACCATTGC TTTGAATTTG GATCCCAAGG GTAACTATCT TATTGGCGAA
GCGATGGAGT CTCTTAAAGA CAAGTAA
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| Protein sequence | MQTDTESFPE PAESAFVMQH LRSIIIHSLD SFNFANAEFA CERLLAMDLE NLDSTYLYNL
TLFRQGKYKS CYAKMINSDA CEHLGCVFIL GQCCLKLQRY KEGIYHLLKL NYLYNESSLE
EGMNTDSSYD PFFFVTPSQK YHYEFRRKIM PDSSMIYHLL GDLYRGMNDV KNSALNYAQA
LKFNQYDFEA FQELCKLGSV GSRGSLKRNT STSLMPNEVG SSSAGAGVGA GSKPSILVNK
EIEKSDKYLY KLYIIFAKSF KSMSKYDCYK AIRLLVLLPE REKETPWVLS KLGRLHFEIV
NYKQSEYYFI KLRKLDRTRL EDMEYYSTLL WHLHRKVELT YLANELHDLD TESPITWCTI
GNLLSLTREP DEAIKCFNKA IKLDDSFTYA YTLKGHEYFG NDNYEMALEN FRMSLLIDSR
HYNALYGIGM VYINLGDYQK ADYHFRKAVS INPINIILIC CVGMVLEKLN KKHLALRQYE
LANKLQPTNP LPIFKMAQLL FSMQQYPQAL KYFEILKDLA PDEASVHFLL GQLYNVQNDK
FSAIREFTIA LNLDPKGNYL IGEAMESLKD K
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