Gene PICST_63845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63845 
Symbol 
ID4841130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp869503 
End bp870288 
Gene Length786 bp 
Protein Length262 aa 
Translation table12 
GC content43% 
IMG OID640392445 
Productpredicted protein 
Protein accessionXP_001386582 
Protein GI150866852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAGCTTTCGT CTGGGTACTT GACGAAATTG AAGCACCATT TGGCAGCAAT ACCACATGTT 
CAACTTTTGG ATGCGCTTGA ACAACAGTCG AGTCCAATTT TGGAAGCATA TATAGACCAA
TATCTAGAGA GCAATAAAAA CTTTGCCAGT CATCCTCGGT TACAGCACAA GCACCAGCTT
TTCTACTTGA AAGATTGTAT GCAACAAGTT TTCGGTCGTA AAAGCGTTCT CTTTAGTGTG
GATATGGAGG CCTGGGAAAT CAATACTAAT GTGATCACCG AAATCGGAAT ATCTATCTTT
GACCCCAGAG GTCAGATGAT GCTGATGCTT CCTTCAACTA ACCAGATCCA TATCCTTATC
CAGGAAAACT ATGAAAAGAG AAATGGCCGA TTTGTTCCCG ACCACTCCAG GAACTTTGTT
GGCGGTACGT CGTTGATAAT GACCAAATAT GAAGCTGCCT GTTTCACCCA AACGTTGATT
GACTACTATT TCCAACTACC CAACGCTGGA TTGAACTGTG CTCTAGTGGG CCACGATGTG
AAAGGTGATG TGAAGTGGCT CAAGCAATTA GGAGTAAATT TTCCTGATAA TATAAAAACT
GTAGATACGA GCACGTTGTT CTCAATTACC CAAGGGAAAA ACGGCAATAG CTTGAAGAAC
GCATTGCTGG CTGTAGATAT ACCTTACTCG TTTCTCCACA ACGCAGGAAA CGATGCCTAC
TACACTTTAC TAGCGGCAAT GAAACTCTGT GATCCCCTGT CTCGGTCTCT CTACGGTTTA
GATATA
 
Protein sequence
ELSSGYLTKL KHHLAAIPHV QLLDALEQQS SPILEAYIDQ YLESNKNFAS HPRLQHKHQL 
FYLKDCMQQV FGRKSVLFSV DMEAWEINTN VITEIGISIF DPRGQMMSML PSTNQIHILI
QENYEKRNGR FVPDHSRNFV GGTSLIMTKY EAACFTQTLI DYYFQLPNAG LNCALVGHDV
KGDVKWLKQL GVNFPDNIKT VDTSTLFSIT QGKNGNSLKN ALSAVDIPYS FLHNAGNDAY
YTLLAAMKLC DPSSRSLYGL DI