| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63832 |
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| Symbol | HOL31 |
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| ID | 4840970 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 750355 |
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| End bp | 752123 |
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| Gene Length | 1769 bp |
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| Protein Length | 570 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640392285 |
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| Product | putative ion transporter |
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| Protein accession | XP_001386551 |
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| Protein GI | 150866826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0755002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0915689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGA CAATTGATAT AGAAAAGACA ACAACAGCCA AGTCTCTCAA CTACGACTTT
GTACCTGGGA CCGTCCACCT AGTGGATGTT ATTGGGAACT TGAGCGTCAA GAAAGATGAT
GGTGGCGAAG ATATCATACT TCAGCCCCAA CCCACTTCAA ACATCAATGA TCCCCTTAGA
TGGTCCAAGG GGAAGAAGAG GTTTCAATTT TTTCTATTAT GGTTATGGTA TGTCTCGATA
CATTCTTTCT TACAACTAAT CAATACTAAC TTTTTGTTTT TAGGAGTTTT CTTCTAGCAG
TTTCTCTTAA TTTCTCTGGT CCCTTGTTTG TTATTTGGCT GGTGGAATTG AAAACGACTT
TCTTCAAATT GAATGTCCAC ATGGCCCTTG GTTTCTTATT CCTTGGTCTT GGGTGTCTCT
TCTTACAACC CACTGCTCTC AAGTTGAGTA GAAGATTTAT TTATTTGTGC TGCACTATCA
TAGCAATTGT AGGTAATGCA GTTGGTTCTC AAGCTACCAG TATTAACTTC TTGTATGTGG
TGAAAATTTT AGTTGGTTTG GCAGCTGCTC CAGTTGACTC GTTGGTTGAG ATTTCTTCCA
CGGATGTTTT CTTCTTACAC GAAAGATCGA GAGCATTCAG TTTGATATTA TTGGCATTGT
ATGGTGGAAG TAATTTGGGT CCTGTTGCCT GTGGGTACAT TGTGCAAACT TTGAGCTGGA
GATGGTGTTT CTATATCCAA ATCATAATTT TAGGAGTTAT GTTTTTCATT CTTCTCTTTT
TGTTGGAAGA CACTTCTTTC AGAAGGGACT TCGACGAAGG TGAGTTAGAG AACAAGATCT
TGGAGCAGAT TAAGTCTAAT GATTCAATGG CTCAAAGAGA TAAGCCTCAG ACTGAAAAGG
GCCATAAATC AGGTGGAATC ATAACCAACT TGAATGAAGT TGTTGATTCT TCTAGTGATG
ATGTCTCTCT AGACAATACC ATTCCTCCTA GAACATACTG GCAAAGAATG CAACTCATTC
AGACGCATTA TAACGATACA AGATCATGGA TCACTATTTT CTATAGACCT TTCTTGTTAG
CCAGCTTTCC AGCTATTATC TGGGGTAGTG TTCTCTATGG TGCACAAATG ATGTGGTTGT
CCTTCTTAGG AGTCACACAA GCACAGATTT ATTCAGCCCC TCCTTACAAC TTCAGTCCAT
CTCTGACTGG ATTGACAAGT GTAGGTGCCT TTGTTGGAAA TTTAATTGGT ATGGTTTACG
GTGGCAACTT CGTCGATTGG ATGACTTTGA AGATGGCCAA GAGGAACCAT GGTATCTTGG
AGCCGGAATT CAGATTGTAC GCTATGATTC TTCCAACCAT CTGCAATGCG GCTGGCCTCT
TGGCCTACGG GTTAGGTTCA TACTATGGTG CACACTGGGC TATTTCAGTT GTCATCGGGC
AAGTCTTTCT TGGATTTGCC ATGAGTGCAG CCGGATCCAT CTGTTTGACA TATGCTGTTG
ATTCATACCA TAATGTTGCA AGTGAAAGTC TTGTGTTGAT GCTTTTCATC AGGAACATGA
TTGGTATGGG ATTCACCTTT GCTATTCAGC CTTGGTTGGT GAGTAACGGA TTGAAGACTG
TGACATGGTT GATGTTCATG CTCTCAATTG TCATCAATGG TTCTTTCATC TTTATGATTA
AGTACGGAAA GAGCATGAGA AGGTGGACAG CCACAAGATA CGAGAAGTAT TCTGATCTTA
ACTACGGAGA ACTCTTCCCT AGAAAGTAA
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| Protein sequence | MTSTIDIEKT TTAKSLNYDF VPGTVHLVDV IGNLSVKKDD GGEDIILQPQ PTSNINDPLR
WSKGKKRFQF FLLWLWSFLL AVSLNFSGPL FVIWSVELKT TFFKLNVHMA LGFLFLGLGC
LFLQPTALKL SRRFIYLCCT IIAIVGNAVG SQATSINFLY VVKILVGLAA APVDSLVEIS
STDVFFLHER SRAFSLILLA LYGGSNLGPV ACGYIVQTLS WRWCFYIQII ILGVMFFILL
FLLEDTSFRR DFDEGELENK ILEQIKSNDS MAQRDKPQTE KGHKSGGIIT NLNEVVDSSS
DDVSLDNTIP PRTYWQRMQL IQTHYNDTRS WITIFYRPFL LASFPAIIWG SVLYGAQMMW
LSFLGVTQAQ IYSAPPYNFS PSSTGLTSVG AFVGNLIGMV YGGNFVDWMT LKMAKRNHGI
LEPEFRLYAM ILPTICNAAG LLAYGLGSYY GAHWAISVVI GQVFLGFAMS AAGSICLTYA
VDSYHNVASE SLVLMLFIRN MIGMGFTFAI QPWLVSNGLK TVTWLMFMLS IVINGSFIFM
IKYGKSMRRW TATRYEKYSD LNYGELFPRK
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