| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50953 |
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| Symbol | MDR18 |
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| ID | 4840893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 613120 |
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| End bp | 614583 |
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| Gene Length | 1464 bp |
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| Protein Length | 488 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640392208 |
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| Product | Polyamine transport protein (TPO4) |
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| Protein accession | XP_001386519 |
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| Protein GI | 126139994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00584761 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.988628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GAGGAAGGTG AACAACAGGC TATTGATGTG AAGGACTTGG ATTGGGACTC GGAAACGGAT
CCTGCCAATC CCCAGAACTG GCCCAAATGG AAGAAGTGGA TTATTACTAT CACTGTGGCT
GTGGTATGTT TGTGTTGTTC CTTGGGTTCT TCTTTATATG TCAGTGGTGC CTTCCAAATA
GTTGCTGAAT TCGATGTATC CTTGGAACTT ACTATTTCGG GGTTGACCTA TTATTTGCTA
GGTTTGGCAT TTGGTCCTCT ATTGACGGCT CCGTTGTCGG AAATCATCGG TCGTAAAATC
ATATACGTCG TATCCTTACC AACAGGTATG TTATTCGTTA TGGGTGTAGG CTTGGCCAAA
AACATACACA CCATCTTGGT GTTGAGATTC TTCTGTGGCT TGTTCACCTC TCCAGCGTTG
TCGGTAGCGG GTGGTACTAT TTCTGACTTG TGGTCCGATA GAATCGAGGA ACTATCACAA
GCGGTAGCAT TGTTCTGTTT GGCTCCTTTC TTGGGTCCTG TTCTTGGTCC CGTAATCGGT
GACTTTGCAG CCGAAGCCAA GGGGTGGAAG TGGTCGGCTT CATGGATCTT GTTGATGTTC
TGTGGTGCTA TTTTGCCATT TGTATTAATC TGTCCAGAAA CATTCAAACC ACAAATCTTG
AAAACCAGAG CTAAGAAGAG AGGTATCAAG ATCATCGAAA GAAATATCAC CGTAAAGCTT
CTTGTTACCA TTCTCATCAA CGATTTGACC CGTCCGCTCG AAATGTTGAT CAAGGAACCC
ATTGTTTTGG TATTGTCGAT CTACATTGCC TTTGTGTTTG CCGTGTTGTT CGGTTTCTTT
GAAGCATTTC CAATCATCTT CAGAGGAGTC TACCACATGG ACAGTGGTGT CTCTGGGTTA
CCATTCCTTG CTGTCGGTCT TGGCTTGGTC AGTGGTGTGC TCTTCTATCT TATTTTGGAT
AAGACCTACT ACTTCCCTAA GAATCCTGAT GGAACCAGAG GTAAAAAGGA TGAAAATGGA
AACCCAATTT GGGATGCTCC CGAGAAGAAG TTACTTCTTG GTAAGATTGG AGGAATCTGT
TTGCCCATTT CCTTGTTCTG GATGGGATGG ACAGGTAGAA ATGATAGCGT TCACTGGATG
GCACCAACTG CAGCAGGATT CCCATTCGGT TTTGGTATGA TTATGGTATT TTTCTCGATC
GTTCTCTACT TCTCCATGTG TTTCCCACCT ATTTACGTCG CCTCTGCTGT CGCTGCCAAC
AACTTGTTGC GTTATATTCT AGCTTCCGTA TTCCCCTTGT TCACTACACA GATGTACGAG
AGATTGACAA TTTCATGGGC CAGTTCGTTA TTTGGGTTCA TTGCTCTTGC TATGGTTCCA
GTTCCATTCA TTTTTGAGAA GTATGGCCCT AAATTCAGAG CTCGTTCTCC ATATGGTTAC
GCTGCCTTCT TCAAAAAGAT TGCT
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| Protein sequence | EEGEQQAIDV KDLDWDSETD PANPQNWPKW KKWIITITVA VVCLCCSLGS SLYVSGAFQI
VAEFDVSLEL TISGLTYYLL GLAFGPLLTA PLSEIIGRKI IYVVSLPTGM LFVMGVGLAK
NIHTILVLRF FCGLFTSPAL SVAGGTISDL WSDRIEELSQ AVALFCLAPF LGPVLGPVIG
DFAAEAKGWK WSASWILLMF CGAILPFVLI CPETFKPQIL KTRAKKRGIK IIERNITVKL
LVTILINDLT RPLEMLIKEP IVLVLSIYIA FVFAVLFGFF EAFPIIFRGV YHMDSGVSGL
PFLAVGLGLV SGVLFYLILD KTYYFPKNPD GTRGKKDENG NPIWDAPEKK LLLGKIGGIC
LPISLFWMGW TGRNDSVHWM APTAAGFPFG FGMIMVFFSI VLYFSMCFPP IYVASAVAAN
NLLRYILASV FPLFTTQMYE RLTISWASSL FGFIALAMVP VPFIFEKYGP KFRARSPYGY
AAFFKKIA
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