| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50944 |
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| Symbol | LRA1 |
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| ID | 4840981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 187502 |
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| End bp | 188278 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640392296 |
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| Product | L-rhamnose 1-dehydrogenase |
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| Protein accession | XP_001386434 |
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| Protein GI | 150866740 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.675484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGGAT TGTTGAATGG AAAGGTGGTT GCAATAACCG GAGGTGTCAC TGGTATCGGA
CGGGCAATTG CCATAGAAAT GGCAAGGAAT GGTGCCAAAG TAGTAGTGAA CCATTTACCA
TCTGAAGAGC AAGCTCAGTT GGCAAAAGAA CTCAAAGAGG AAATCCTGGA CGGTGAAAAC
AACGTGCTCA CCATTCCAGG GGACATCTCG CTCCCTGAAA CAGGCAGAAG GATAGTGGAG
CTTGCAGTTG AAAAGTTTGG CGAAATCAAT GTGTTCGTTT CCAATGCTGG TGTCTGTGGG
TTCAGAGAGT TTCTTGAAAT AACTCCCGAA ACTTTGTTTC AGACGGTGAA TATTAACTTG
AATGGAGCCT TCTTCGCCAT CCAAGCAGCT GCACAACAAA TGGTCAAGCA GGGCAAAGGA
GGTAGCATTA TTGGAATCAG CAGCATCTCT GCCTTGGTTG GAGGAGCACA CCAAACCCAT
TACACACCAA CTAAAGCTGG AATCTTGTCC TTAATGCAAT CTACAGCATG TGCTCTAGGT
AAGTATGGAA TCAGATGCAA TGCGATCCTC CCAGGGACAA TCAGTACAGC CTTGAACGAA
GAGGACTTGA AAGATCCAGA GAAGAGAAAG TACATGGAAG GGAGAATACC TCTAGGAAGA
GTCGGTGACC CCAAGGATAT TGCTGGACCT GCTATCTTCT TGGCAAGTGA TATGTCTAAC
TACGTTAATG GAGCACAACT ACTTGTTGAT GGAGGATTGT TCGTCAATTT ACAATAG
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| Protein sequence | MTGLLNGKVV AITGGVTGIG RAIAIEMARN GAKVVVNHLP SEEQAQLAKE LKEEISDGEN
NVLTIPGDIS LPETGRRIVE LAVEKFGEIN VFVSNAGVCG FREFLEITPE TLFQTVNINL
NGAFFAIQAA AQQMVKQGKG GSIIGISSIS ALVGGAHQTH YTPTKAGILS LMQSTACALG
KYGIRCNAIL PGTISTALNE EDLKDPEKRK YMEGRIPLGR VGDPKDIAGP AIFLASDMSN
YVNGAQLLVD GGLFVNLQ
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