Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_50804 |
Symbol | |
ID | 4841020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 932986 |
End bp | 933780 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640392335 |
Product | predicted protein |
Protein accession | XP_001386598 |
Protein GI | 126140152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGGG ATGGTTTCAA AAAAGCCATC AACAGAGCCG GGGCATCCGT CACTGTCAAG AACGTGGATA AGACCATGGA TAAGGACTTT GACACCGAAG AAAGAAGATA TAAAACGTTG AACACAGCAG GTACTAGCTT GCAAAAATCA TCCAAGGGTT ACTTGGACTC ATTGAGAGCC ATGACGGCTT CTCAGGTCAC TATTGCTGAA ATTGTGTCCA ACTTATATGA AGAGGCCAAA CAAGGTCCAT CTGTGTATTC CAACGTAGGA AACTTGTATT TGCAATGTGT GCGTGAATTT GACGAGGAGA CTGTGAAACA GATGGATGGC CCGTTCAGAG AAACCATTTT GGACCCTATA ACCAAATTCG CAGGGTATTT CAAGGAAATA GACGAGGCTA TAAAGAAGAG AGCCCACAAG AAAATAGACT ATGACCAGTG TAAGGCTAAG GTGAGACGGC TAATTGATAA ACCAGCAAAG GATGCAGGCA AGTTGCCTCG TGCTGAAAAG GAGTTGCAAG TTGCAAAAGA AATCTTTGAC GACTTGAACG AGCAATTGAA GGCTGAGTTG CCGCAATTGA TTGCGTTGAG AGTTCCATTC TTAGACCCTT CGTTCGAGGC ATTGGTCAAG ATCCAAATGC GTTTTTGTAC AGAGGGCTAC TCTAGATTGG CCCAGATCCA GCAGTACTTG GACCAGAATT CCAGAGACGA ATATGCGAAC GGATTGTTGG ACGGTCGTAT CGACGACTTG ATTGGCCAGA TGAACTCGTT GAACATCGCA ACTTTGGGCA AATAG
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Protein sequence | MSWDGFKKAI NRAGASVTVK NVDKTMDKDF DTEERRYKTL NTAGTSLQKS SKGYLDSLRA MTASQVTIAE IVSNLYEEAK QGPSVYSNVG NLYLQCVREF DEETVKQMDG PFRETILDPI TKFAGYFKEI DEAIKKRAHK KIDYDQCKAK VRRLIDKPAK DAGKLPRAEK ELQVAKEIFD DLNEQLKAEL PQLIALRVPF LDPSFEALVK IQMRFCTEGY SRLAQIQQYL DQNSRDEYAN GLLDGRIDDL IGQMNSLNIA TLGK
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