Gene PICST_50804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50804 
Symbol 
ID4841020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp932986 
End bp933780 
Gene Length795 bp 
Protein Length264 aa 
Translation table12 
GC content45% 
IMG OID640392335 
Productpredicted protein 
Protein accessionXP_001386598 
Protein GI126140152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGG ATGGTTTCAA AAAAGCCATC AACAGAGCCG GGGCATCCGT CACTGTCAAG 
AACGTGGATA AGACCATGGA TAAGGACTTT GACACCGAAG AAAGAAGATA TAAAACGTTG
AACACAGCAG GTACTAGCTT GCAAAAATCA TCCAAGGGTT ACTTGGACTC ATTGAGAGCC
ATGACGGCTT CTCAGGTCAC TATTGCTGAA ATTGTGTCCA ACTTATATGA AGAGGCCAAA
CAAGGTCCAT CTGTGTATTC CAACGTAGGA AACTTGTATT TGCAATGTGT GCGTGAATTT
GACGAGGAGA CTGTGAAACA GATGGATGGC CCGTTCAGAG AAACCATTTT GGACCCTATA
ACCAAATTCG CAGGGTATTT CAAGGAAATA GACGAGGCTA TAAAGAAGAG AGCCCACAAG
AAAATAGACT ATGACCAGTG TAAGGCTAAG GTGAGACGGC TAATTGATAA ACCAGCAAAG
GATGCAGGCA AGTTGCCTCG TGCTGAAAAG GAGTTGCAAG TTGCAAAAGA AATCTTTGAC
GACTTGAACG AGCAATTGAA GGCTGAGTTG CCGCAATTGA TTGCGTTGAG AGTTCCATTC
TTAGACCCTT CGTTCGAGGC ATTGGTCAAG ATCCAAATGC GTTTTTGTAC AGAGGGCTAC
TCTAGATTGG CCCAGATCCA GCAGTACTTG GACCAGAATT CCAGAGACGA ATATGCGAAC
GGATTGTTGG ACGGTCGTAT CGACGACTTG ATTGGCCAGA TGAACTCGTT GAACATCGCA
ACTTTGGGCA AATAG
 
Protein sequence
MSWDGFKKAI NRAGASVTVK NVDKTMDKDF DTEERRYKTL NTAGTSLQKS SKGYLDSLRA 
MTASQVTIAE IVSNLYEEAK QGPSVYSNVG NLYLQCVREF DEETVKQMDG PFRETILDPI
TKFAGYFKEI DEAIKKRAHK KIDYDQCKAK VRRLIDKPAK DAGKLPRAEK ELQVAKEIFD
DLNEQLKAEL PQLIALRVPF LDPSFEALVK IQMRFCTEGY SRLAQIQQYL DQNSRDEYAN
GLLDGRIDDL IGQMNSLNIA TLGK