Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_50547 |
Symbol | GIT3 |
ID | 4841068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 383504 |
End bp | 385096 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640392383 |
Product | glycerophosphoinositol permease |
Protein accession | XP_001386465 |
Protein GI | 126139886 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTA GAGATTTGCC TCGCTCTGTC AGCGACCTTT TCCTTGGTTG GACCAGACAC TTGGGCAATG AAATCACTTT GAACAAGTCT AAACAGCAAT TGTTCGACGA TGACATGCAA CCAGATGGAG CTGAAAAAGA AAAGGACGTC AAGGCAAGAA ACTTATGGCC AGCCTTCTGT TCTGGTGCCG GTCTCTTTTC CGATGGTTAT GTTAACAATT CGATCGGTAC GGTGTCTTAT GCCTTAAGCA GGCTCTACGA GGATGAGTAT GAAAATTCTA CTGCTATATC CAACGTTGGG TCAATTGCCT TCGCTGGTAC GGTGGTTGGA CAATTGGGAT TTGGATACAT ATCTGACAGA ATAGCCAGAA AAGGAGGAAT GATGATTGCC AACGTCATGT TGATCATTTT TGCTCTCTTG TGTGCTGTTG CTACTTGGGG TAAAAATCCG CAAGGATTGT TTGCTGCCCT CACTGTATTC CGTTTCTTCT TGGGTATAGC TATCGGAGCT GAGTATCCTA CGGCTTCTGT TATTGCCTCA GAGTTCGCCA ACCAATTGCC AGCCGGAAAG AGAAACAGAT ACTTCGTGTG GTTCACCAAT TCCATGATCG ACTTTGGATT TGTTGTTTCA GCATTCGTTC CTTTGGTACT CTTGTGGATC TTCTCCGACA GACATTTAAG GGTCATCTGG AGATTGACCC TTGGTTTAGG TGCCATTCCT CCTTTTGCCC TTTTCTTCAT GAGATTGAAA ATTGCCGACT CCGAGTCGTT TCAGAAGTTG AATATGAAGA AGGTCAAGAA GTACCCTTAC TGGTTGATCA TCAAGTTCTA CTGGTTCAGA TTGAGCGTTA TCTCGTTGAT CTGGTTCATC TACGATGTGT CGGCCTACTC ATTCAGTATC TACTCCAATT TCATGATTGG CCGCATTACT GACGGCGATA TCTATAAGAC TTGGGGTTGG AACGTTGTGT TCAACTTGTT CTACATGCCT GGTTCCTTCT TGGGTGCCAT TGCAGCCGAT TATATTGGTC CTAGATTAAC GTTAGCACTT GGTGTAGGCT TGCAGGGTAT CATTGGTTTC ATCATGGCTG CCTGTTACCC AAGCTTGAAA CATCATGTTG GTGCTTTCGT AGTAGTTTAC GGTATCTTCT CCACTTTGGG TGAATTCGGT CCTGGTGATA ACATCGGTTT GTTAGCCTCC AAGACTAGCG CCACTCCTAT CAGAGGTCAA TACTATGGTA TAGCTGCCGC AGTGGGCAAA ATTGGTGCTT TTGTAGGTGT CTATATTTTC CCAGTTATCA TTAGGAATGC TGGTGGAAAA GACACAGACA GTGGTAACCA GGCACCATTT TATGTTTCTT CAGCCTTGTG TATATTCTCT GCTATCTTGG CACTTTTCTT CTGTCCCTCT GTCGGCCAGG ATGCCATTAA CAAGGAAGAT GAAGACTTTG TCGCTTACCT TCGGAAGAAT GGTTACGATG TCGGCCAATT GGGTGCTGGA GCCTTGGAGG AAACATCGTT TGAGGAGGTT GAATATGACG ACAAGACAAA GAAGTCATCC GAAGTCGTCA GAGTCCAGGA AAAGAGCTAT TAG
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Protein sequence | MASRDLPRSV SDLFLGWTRH LGNEITLNKS KQQLFDDDMQ PDGAEKEKDV KARNLWPAFC SGAGLFSDGY VNNSIGTVSY ALSRLYEDEY ENSTAISNVG SIAFAGTVVG QLGFGYISDR IARKGGMMIA NVMLIIFALL CAVATWGKNP QGLFAALTVF RFFLGIAIGA EYPTASVIAS EFANQLPAGK RNRYFVWFTN SMIDFGFVVS AFVPLVLLWI FSDRHLRVIW RLTLGLGAIP PFALFFMRLK IADSESFQKL NMKKVKKYPY WLIIKFYWFR LSVISLIWFI YDVSAYSFSI YSNFMIGRIT DGDIYKTWGW NVVFNLFYMP GSFLGAIAAD YIGPRLTLAL GVGLQGIIGF IMAACYPSLK HHVGAFVVVY GIFSTLGEFG PGDNIGLLAS KTSATPIRGQ YYGIAAAVGK IGAFVGVYIF PVIIRNAGGK DTDSGNQAPF YVSSALCIFS AILALFFCPS VGQDAINKED EDFVAYLRKN GYDVGQLGAG ALEETSFEEV EYDDKTKKSS EVVRVQEKSY
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