Gene PICST_50535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50535 
SymbolPET8 
ID4840846 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp835867 
End bp836762 
Gene Length896 bp 
Protein Length277 aa 
Translation table12 
GC content47% 
IMG OID640392161 
ProductMitochondrial carrier protein PET8 
Protein accessionXP_001386750 
Protein GI150866968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACC AGACGTTCGT GATCTCGTTG ATCGTAAGTG AAGACGACTT TTATGTATAA 
TTCGAATTTT CAAGATTTGC TAACAATTTC TACAGAGTGG AGGATGTGCT GGTACTTCGA
CCGATCTCGC GTTCTTCCCA TTAGATACGC TCAAGACCAG ATTACAGGCA AAGGGAGGAT
TTTTCCATAA CGGAGGATGG CACGGTATAT ATAAGGGCCT AGGCTCGTGT GTTGTAGCAT
CAGCACCTTC AGCTTCGTTG TTTTTCATCA CCTATGACTC CATGAAGATA TACACCAAGG
AATATGTTCT GCCAGCCCAG AGCCATATGA TTTCAGCCTC TTGCGGAGAA ATGGCTGCTT
GTATGGTACG AGTTCCGGCC GAGGTTATTA AGCAGAGAAC ACAAACTGGA ATTGCCGGTG
TCAACGGAAC CTCGAGTTCG TGGGCTAACT TCTTGTACTT GGTCCAGAAC AAGTCTGGAG
AAGGTGTACT TAAAGGGCTC TACAGAGGAT GGAATACTAC TATAATGAGG GAGATTCCGT
TCACAGTGAT TCAGTTCCCC CTTTACGAGT GGTTAAAGAT GAAGTGGGCT CTGGCCACAG
GAGGCAGAGA TCTCAGTGTA GTGAAAGGAG CTATTTGTGG TTCCATAGCA GGTGCTGTAG
CTGCAGCAGC AACAACTCCG CTAGATGTAA TAAAGACGAG GATCATGTTG AACAAGGAGA
GAGTAAGCAT TGGACAATTG GTGCGAACCA TGGTGGCAGA GGAGGGGTAT CTGACATTTT
TGAAGGGTAT AGGCCCTAGA ACAGCCTGGA TCAGCGCTGG TGGAGCCATC TTCTTGGGCT
GCTACGAGCT TGTTCATACA AACTTGACGT CATACCAAAG GAGAAAGTTG GCGTAG
 
Protein sequence
MDNQTFVISL ISGGCAGTST DLAFFPLDTL KTRLQAKGGF FHNGGWHGIY KGLGSCVVAS 
APSASLFFIT YDSMKIYTKE YVSPAQSHMI SASCGEMAAC MVRVPAEVIK QRTQTGIAGV
NGTSSSWANF LYLVQNKSGE GVLKGLYRGW NTTIMREIPF TVIQFPLYEW LKMKWASATG
GRDLSVVKGA ICGSIAGAVA AAATTPLDVI KTRIMLNKER VSIGQLVRTM VAEEGYSTFL
KGIGPRTAWI SAGGAIFLGC YELVHTNLTS YQRRKLA