| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50486 |
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| Symbol | HAP5 |
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| ID | 4841013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 796535 |
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| End bp | 796882 |
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| Gene Length | 348 bp |
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| Protein Length | 116 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640392328 |
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| Product | CCAAT- binding transcription factor component |
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| Protein accession | XP_001386744 |
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| Protein GI | 126140444 |
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| COG category | [K] Transcription |
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| COG ID | [COG5208] CCAAT-binding factor, subunit C |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.75707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTCAGCAATG TGGGGCAGGG CTTGACAGGT AAGCACAGAG ACATGATGAT GCAATATTGG
CAAGAGACGA TTAACTCGAT CGAGCACGAC GACCACGACT TCAAGAACCA CCAACTTCCA
CTTGCCCGTA TCAAAAAGGT CATGAAGACG GATGAGGACG TACGCATGAT CAGTGCCGAA
GCTCCCATTC TCTTTGCTAA AGGCTGTGAT GTTTTCATCA CTGAGCTTAC AATGAGAGCT
TGGATCCACG CCGAAGAAAA TAAGAGAAGA ACATTGCAGA AATCCGATAT CGCTGCTGCT
CTCACCAAAA GTGACATGTT TGATTTCTTG ATCGATGTAG TGCCTCGT
|
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| Protein sequence | FSNVGQGLTG KHRDMMMQYW QETINSIEHD DHDFKNHQLP LARIKKVMKT DEDVRMISAE
APILFAKGCD VFITELTMRA WIHAEENKRR TLQKSDIAAA LTKSDMFDFL IDVVPR
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