Gene PICST_50439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50439 
Symbol 
ID4841146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp736374 
End bp736817 
Gene Length444 bp 
Protein Length147 aa 
Translation table12 
GC content49% 
IMG OID640392461 
Productpredicted protein 
Protein accessionXP_001386733 
Protein GI150866958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.61615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.770378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTGACATCA TCAAGACTTT TCCTGATGTT GACGAAAAAC CAGTTCCAGG CGACTCTCCC 
ATCGTCCAAT GTGATGCCTC GCAGCCACAG ATTTTGAGTT TGCTGAAGGT CATCATTGAC
CCTAACCCTC CTGCTAGGGG CGAGAACTTA ACCTTCACCG CCACTGGTTT TATCAGCGAA
GACATCGAAG AAGGTGCCTA CGTTGAAGTC GACGTTAGAT ACGGCTTCAT CAAGTTGATC
CACCAGACGT TTGACTTGTG TGAGGAAATC ACCAAGGTCG ACTTGGAATG CCCAATCAAG
AAGGGACCAC AGGTCATTCA GAAGGAAGTT GAGATTCCTA ACGAAGTTCC TCCAGGGAAG
TACATTGTCA ACGCCAGAGC CTACACCAAG GACGACGTGT TCATCACCTG TTTGACTGCA
ACAATCGAGT TCCCACCACT CTAG
 
Protein sequence
LDIIKTFPDV DEKPVPGDSP IVQCDASQPQ ILSLSKVIID PNPPARGENL TFTATGFISE 
DIEEGAYVEV DVRYGFIKLI HQTFDLCEEI TKVDLECPIK KGPQVIQKEV EIPNEVPPGK
YIVNARAYTK DDVFITCLTA TIEFPPL