| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50416 |
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| Symbol | SDH2 |
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| ID | 4840991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 429175 |
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| End bp | 429963 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640392306 |
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| Product | succinate dehydrogenase subunit |
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| Protein accession | XP_001386475 |
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| Protein GI | 126139906 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.104068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAGAT CTGTTTTGCG TTTCCAACAG CCAACCAGAG CTTTTGTGAG AGGTTTGGCT
ACTTCGGCTG AAAAGACTTC AAGAATCAAG AGTTTCCAGA TCTACAGATG GAATCCAGAC
ACACCAGAAG TGGCTCCCAC TATGCAGAAG TACGATATAG ACTTGAACGA CTGTGGTCCC
ATGGTTCTAG ATGCGATCTT GAAGATCAAG AACGAGCAGG ATTCAACCTT GACGTTCAGA
AGATCGTGTC GTGAAGGTAT CTGTGGTTCG TGTGCCATGA ACATTGGAGG CAGAAACACC
TTGGCCTGTT TGTGTCGTAT AGACACCGAC ACTTCGAAGG ATTTGAAGAT CTACCCATTG
CCTCACATGT TTGTAGTGAG AGACTTGGTA CCAGACTTGA CCCACTTCTA CAAGCAATAC
AAATCCATTC AGCCATATTT ACAGAGAGAC ACACCTCCAA CTGACGGTAG AGAGAACTTG
CAGTCAATTG AAGACAGAGC TAAGTTGGAT GGTTTGTACG AGTGTATCCT CTGTGCCTGT
TGTTCTACTT CGTGTCCTTC TTACTGGTGG AACCAACAGC AATACTTGGG TCCAGCCGTG
TTGATGCAGG CCTACAGATG GTTGATCGAC TCCAGAGACG AAGCCTCCAA GATCAGAAGA
GAAATGTTGC AGAACTCAAT GTCGTTGTAC AGATGCCACA CCATCATGAA CTGCTCGAGA
ACATGTCCTA AGGGCTTGAA CCCGGGTAAG GCCATTGCCG AGATCAAGAA GCAGTTGGCT
TTTGATTAG
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| Protein sequence | MFRSVLRFQQ PTRAFVRGLA TSAEKTSRIK SFQIYRWNPD TPEVAPTMQK YDIDLNDCGP
MVLDAILKIK NEQDSTLTFR RSCREGICGS CAMNIGGRNT LACLCRIDTD TSKDLKIYPL
PHMFVVRDLV PDLTHFYKQY KSIQPYLQRD TPPTDGRENL QSIEDRAKLD GLYECILCAC
CSTSCPSYWW NQQQYLGPAV LMQAYRWLID SRDEASKIRR EMLQNSMSLY RCHTIMNCSR
TCPKGLNPGK AIAEIKKQLA FD
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