Gene PICST_50366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50366 
SymbolNRL2 
ID4840887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp272997 
End bp273965 
Gene Length969 bp 
Protein Length323 aa 
Translation table12 
GC content40% 
IMG OID640392202 
ProductAliphatic nitrilase 
Protein accessionXP_001386453 
Protein GI126139862 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0141714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTC CTGTCACACG GGTGGCTGCT TGCCACTTTG CACCTGTTAT GATGAATAAG 
GAGGCAACGA TGGAGAAAGT GTTCAATGGG GTGAGTGAAG CAGCATCCAA GGGTGCAAAT
TTAATTGTAT TTCCAGAAAC ATATGTATCC GCTTTTCCTT TATGGGGAGC ATGCAAAGCT
CCAATTGACA ATCATCACTT ATTCAAACAA CTTGTTGAAA GTTCAATTTA TATAGATGGA
CCTGAAATTT CCTCTTTGCA ATCACTTTGC AAAGAGTTAT CAGTTGTAGT ACTATTAGGT
TTCAATGAAA GATCTCGTGT TAGTGTCGGC TGCCTATGGA ACTCATATGT CTTGATTGAT
GAAAATGGAA CTATTGGAGC ACATCATAGA AAGCTAGTTC CTACCTTTTT TGAGAAGCTC
TCTTGGGCCA ATGGGGATGG TTCAGGTTTG AATGTTATTG ACTCAAAATA TGGAAAGATT
GGGTGTCTAA TATGTGGGGA GAACACCAAC TCGCTAGCAA GATTTACACT TCTTAGCCAA
GGTGAGCAGA TTCATATATC CATTTGGCCC CCTGCAGCAG ATATGCACCG TCCTTCAGAA
GAGACCAAAA GCTTCGACAA TATTACCGCT AACAAGATAA GGTGTGGGGC CCAATGTATA
GAGGGTAAAT GCTTTGGGGT CCTCAGCTCA TCATTTGTGG ACCAAGCAAT GTTGGACTTT
TTGATTAAGG ATGACCCATC CAATGCATCC TTTTATAATA ACATGTCCCA AGGAATAACT
TGCTTCTTGT CACCTTCTGG AAATGAAATA GGGGATTCAT TAAGATTTCA AGAGGGAATT
GCGTATGCGG ATTTTGACTT AAATACCACT ATCGAGCCTA AACAGTTCCA TGATCTTGTT
GGTGGGTACA ATCGATTTGA CGTATTTAAG CTTCACGTAA ATAGATCTCG TAACATTCCG
ATTTACTTT
 
Protein sequence
MTLPVTRVAA CHFAPVMMNK EATMEKVFNG VSEAASKGAN LIVFPETYVS AFPLWGACKA 
PIDNHHLFKQ LVESSIYIDG PEISSLQSLC KELSVVVLLG FNERSRVSVG CLWNSYVLID
ENGTIGAHHR KLVPTFFEKL SWANGDGSGL NVIDSKYGKI GCLICGENTN SLARFTLLSQ
GEQIHISIWP PAADMHRPSE ETKSFDNITA NKIRCGAQCI EGKCFGVLSS SFVDQAMLDF
LIKDDPSNAS FYNNMSQGIT CFLSPSGNEI GDSLRFQEGI AYADFDLNTT IEPKQFHDLV
GGYNRFDVFK LHVNRSRNIP IYF