| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50222 |
|---|
| Symbol | |
|---|
| ID | 4841142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | + |
|---|
| Start bp | 711592 |
|---|
| End bp | 711984 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640392457 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386544 |
|---|
| Protein GI | 150866821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.936228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGC CAATCAAGGG GACCGACGCT GATACTCTGA CTGTAGCCAA AGAAGCAGTT
CCTAACAAGC CAGAACCAAT AGACTCAGAC TATGTGGAAA CAGACAAAGA CAAAGTAGAC
TTCACCAAGG GGGGAGTTGA AAAGTTCAAG TTCTATCCCG ACAATCCCGA GAACCACAGA
CACAAGTACA AATGGACCCA TAAGGAGCCT TCGAAGTACT ACGATCCGTG CGAAGAAAGT
AGACAGGCTT CCTTGAATTG CATTTTGAGA AACCAAGACG ACAAACTTGT ATGTCAGGAT
TTCTTTGACG CTTATAAGGA ATGTCGTAAA GATTTCTTTA ATAAGAAGAG AAAGGACCGG
ATAGAGGGTA GAGGAGGCTG GGGATTCTGG TAA
|
|---|
| Protein sequence | MSEPIKGTDA DTSTVAKEAV PNKPEPIDSD YVETDKDKVD FTKGGVEKFK FYPDNPENHR
HKYKWTHKEP SKYYDPCEES RQASLNCILR NQDDKLVCQD FFDAYKECRK DFFNKKRKDR
IEGRGGWGFW
|
|---|
| |