Gene PICST_50220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50220 
Symbol 
ID4841160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp625560 
End bp625856 
Gene Length297 bp 
Protein Length98 aa 
Translation table12 
GC content46% 
IMG OID640392475 
Productpredicted protein 
Protein accessionXP_001386714 
Protein GI126140384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.345333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATA TTCTCAATGT GTTCAATCCA CCTCCATCGC GGCCCTTGAC TGAGGATGAG 
ATCGGCGAGG GCTGTATTCC TTGTACTGCA GTGCAATCGG TCGTGGCTCT AGCAGGGGGT
GTCTATTTGA ACTCCAATAC CCTTTTCAAA GACCCAAAAA CTGGCAAAAT CGACTTTGCA
AAGAATCCCA TCTGGTGGCA GAAAACCGTT AAAGGATTTG GTATAGTGTT GTTTGGTTTA
GGTGCCTACA GAGCTGGAGA AGTAGGCCAG TTGGTGTGGA AGAAGAAATT CGAATGA
 
Protein sequence
MSNILNVFNP PPSRPLTEDE IGEGCIPCTA VQSVVALAGG VYLNSNTLFK DPKTGKIDFA 
KNPIWWQKTV KGFGIVLFGL GAYRAGEVGQ LVWKKKFE