Gene PICST_50166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50166 
SymbolKRI1 
ID4840983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp199301 
End bp201022 
Gene Length1722 bp 
Protein Length573 aa 
Translation table12 
GC content40% 
IMG OID640392298 
ProductKRRI-Interacting protein 1 
Protein accessionXP_001386436 
Protein GI150866742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAA AGAAGTCTGC TGCGAAGAGG GCCAGAGAGG CTGCTGTGGT TAAGGAAGTG 
CAAGAAAATG GGTCTTCCAA GCAAGAAACG AAGGAAACCG CAAAACCAGA AGAAAAAAAG
GTTTCTTTCT CAGACTCCGA ATCTGAATCT GAGTCTTCTT CAGAAGATGA AGACGAACTT
GGTGATTTGA TTACAGAAGA TGTCGAGGCT GGTATCAACA ATGTTTTGCA GGCTATTAAG
GAGAATCCTA CGAAATTACT TGATCCGAAT GTAAAGTTTT TTGAAGATCC AGAGAATTTC
ACTGAGACTG CTACTAAAAA AGAGAAGCCT TTGTACTTGA AAGATTACCA TAGACAGAAC
TTACTTTCAG GAGGTTATAA GGATGAAGAT GAAGACAACG AATATGGAAC CATAGACGGT
GAAAAGCCAT TTGTGGTGAC TCAAAGAGAA GAAAGAGACC AATTGCTTGC TGATATCAAA
AGTGCTTTCA ATGAAGAGGA AGACGAAGAA GATGACGATG ACGATTTTTT GAAGAAGAAG
GAAGAGGCTG CTAACCACAT TCATCCAGAT CGTCAAGTAA CGAGACTTCC AGACCCCAAT
GAAAATGAGC AAGGCTTTTT AGAAGCTTTT GTGAATGACA GAGCCTGGAT TCCCAAGAAG
AATGACAAGG TTATCAATTT AGACAGGATT GACCAGAATG ACGAAGAAGA CTTTGATGAT
GCTGTAGAGA AGTTTGAGCA TGCCTACAAC TTCAGATATG AGGATGCCAA CTCAGCCGAA
ATTGTGTCAT ATGCTCGTAA CCAAGCTACG ATCAGAAGAT CTGCCACTAA CAGTCGTAAG
AGACAAAGAG AAAAACAGCA AGAAGTGAAA GAACAAGAGA ATAATGAGAA GGAAGCTTTA
TTGAAGAAAA AGAAGACTAC CAAATTGAAC AAGGTTATGG ACAGATTGCA AAAGATAAAA
GAAGCGGTAG GAGGAGAAAT GAAAGACGAA GTTATTGAAA AGGTTTTTGG AGACAGTTTG
CTTAAGGAGG ACTTTGATGA TGCTGACTGG GACAACAAAA TGGCGGAAAT ATTCAACGAG
CAATATTATG GCGATGAGAA TGAAAAGCCC GTGTGGGATG AAGACGATGA GATCATGGCC
GATTTCCACA AGGGTGATGA TAATGATGAA GATGATGGAC CAGAAGTAGA TGAGGAGGAA
GAGGAAGCAG ATCAGGAGCA AGAAAAAACA AAGAAGAAGT CCAAGAAGGA TAAGTTGAAG
GAAAAAAAGT CAGTCAAGAA AGACAAAGAG CTGTTGAGAG TTAAGGCACA AGAAATAGTA
GAGGCCAATA CTCATGTTCT CATTGATGAA GTTGAAGAAG AAAGAGGACG TTCTAAGGGT
AAAGAAGATC TTCTATTTAA GTACCGTGAA GTTTCACCAG AGTCATTTGG TTTGACTACA
AGAGAAATCT TGCTTGCTGA TGATAAGCAG TTGAACACCT TCATTGGTAT TAAGAAATTT
GCACCATACA GACCCAAGGA ACTGAGAATG AAGGACAAGA GAAAGTACAC CAAGAAGAAG
CAGTTACAGG AATGGAGAAA GGAAGTGTTT AAAGACAAAA ATGGTCCAGC TGCTCCTGAA
GATGACAAGT ACGATATCTG GATACCTACG GAAGAGGAAG AGACAAGAAA GAAATCACAC
AAGGATAAAA GTCATAAGAA GCACAAGTCG AAGTCAAAAT AG
 
Protein sequence
MARKKSAAKR AREAAVVKEV QENGSSKQET KETAKPEEKK VSFSDSESES ESSSEDEDEL 
GDLITEDVEA GINNVLQAIK ENPTKLLDPN VKFFEDPENF TETATKKEKP LYLKDYHRQN
LLSGGYKDED EDNEYGTIDG EKPFVVTQRE ERDQLLADIK SAFNEEEDEE DDDDDFLKKK
EEAANHIHPD RQVTRLPDPN ENEQGFLEAF VNDRAWIPKK NDKVINLDRI DQNDEEDFDD
AVEKFEHAYN FRYEDANSAE IVSYARNQAT IRRSATNSRK RQREKQQEVK EQENNEKEAL
LKKKKTTKLN KVMDRLQKIK EAVGGEMKDE VIEKVFGDSL LKEDFDDADW DNKMAEIFNE
QYYGDENEKP VWDEDDEIMA DFHKGDDNDE DDGPEVDEEE EEADQEQEKT KKKSKKDKLK
EKKSVKKDKE SLRVKAQEIV EANTHVLIDE VEEERGRSKG KEDLLFKYRE VSPESFGLTT
REILLADDKQ LNTFIGIKKF APYRPKESRM KDKRKYTKKK QLQEWRKEVF KDKNGPAAPE
DDKYDIWIPT EEEETRKKSH KDKSHKKHKS KSK