Gene PICST_37279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37279 
Symbol 
ID4841012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp794264 
End bp794707 
Gene Length444 bp 
Protein Length147 aa 
Translation table12 
GC content43% 
IMG OID640392327 
Productpredicted protein 
Protein accessionXP_001386565 
Protein GI126140086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGG TATTCTTACC TCATTTAAGA ACAGGATGGC ATGTCGACCA AGCGATTTTG 
TCGGAAGATG ATCGGTTGGT AATAGTGAGA TTTGGCCGAG AAGAAGAGAA GGATTGTATG
ATAATAGACG AGGTGCTATT CCAGATTTCC GAGAAGATCA AGAACTTCGC CGTGATTTAC
CTCTGCAACA TCGATCGGGT GCCGGACTTC AACACAATGT ACGAACTAGA TAATCCTGGG
GAGCCGTTTA CGATAATGTT CTTCTATAGA AACAAGCACA TGATGTGCGA TTTTGGCACA
GGTAATAATA ACAAATTGAA CTTCATGATT TCCGACAAGC AGGAATTGAT AGATATCATA
GAGACGATCT ACAGAGGAGC AAAGAAGGGT AAGGGGTTGG TGATCTCACC CACGGACTAC
AGTACAGTGA GGAAGCTCCG ATGA
 
Protein sequence
MGSVFLPHLR TGWHVDQAIL SEDDRLVIVR FGREEEKDCM IIDEVLFQIS EKIKNFAVIY 
LCNIDRVPDF NTMYELDNPG EPFTIMFFYR NKHMMCDFGT GNNNKLNFMI SDKQELIDII
ETIYRGAKKG KGLVISPTDY STVRKLR