Gene PICST_37241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37241 
Symbol 
ID4841166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp652233 
End bp653165 
Gene Length933 bp 
Protein Length310 aa 
Translation table12 
GC content46% 
IMG OID640392481 
Productpredicted protein 
Protein accessionXP_001386529 
Protein GI126140014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.136249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGG TGCGCAGATT GCTAATTCGT GCTGCGAACA ACTACGATAA AGACTTCAAA 
GTAGTACCAA TAAACACCAA TACGCCTGTC GAGATCGATT CAGACATCGG CGTATTTCAA
GTCTATGTTA ATACCAAGAA GTTTGATGGC TCTAAGCCTC ATTTAGACAA CAGTTTATAC
GAATTGGGTG ACAATGTTTA TCTCAATGGC GAACCGGTAG ATGCCGACGT TACCGACGCT
GACGAGCTCA CCAAACTAGT CAATTCCAAT ATGCGTATCA ATATCAAGTT CACACCCAAA
GTGCCCATAA AGGGCTCCGA ATTGATCTTT GGGAACGATT TCACAGTTCC CATTAGGAAC
CATGTGCCAA CGACACTTCT ATCTACGGGA CTCAAGTTCT TCCAGTGGTT CGTCAACAAG
ACCGTGAGAG GCGATATCTA CGACGACGAA CCTTATCTCT ACGGGCTTGC CTTGAATAGT
TTTACATACT TGGCTGTCGA TACCGATGGA GAACCGACAC AGAGACTCTC CGGACCTGCG
TCATACTTGG CCCACAAGCC CTTGATGGAG TTCATCAACT ACATTGAGAA TCTCAACGAC
AATCCTGACA ACACGCTAAA AATTCCTACG ACTTCCAACG CCCGTCGCAA GTTCTTCCTT
GACGTTGACA ACTGTGATGC GTTTGTATTC AACGAAGGTA CAACCTACAA CTTACAGTTC
GACACCCGAT TCCTCAAAAT GGAAGACTCG CAATACGCCG TAAGCATCCC TACGTTTGGA
AGCAAGACAT TCGACGTCAA CGTGAATAAC TACGCCAACG AGCACTTGAA TAACTTCAAC
TTCACTGTCA AGCAGAACGG CTACGAGGGT GTAAGATACG GCACCTATGG CTTGGTGATA
AATTTCGCCT TGTTGGACGA GGAAGGACAG TAA
 
Protein sequence
MTVVRRLLIR AANNYDKDFK VVPINTNTPV EIDSDIGVFQ VYVNTKKFDG SKPHLDNSLY 
ELGDNVYLNG EPVDADVTDA DELTKLVNSN MRINIKFTPK VPIKGSELIF GNDFTVPIRN
HVPTTLLSTG LKFFQWFVNK TVRGDIYDDE PYLYGLALNS FTYLAVDTDG EPTQRLSGPA
SYLAHKPLME FINYIENLND NPDNTLKIPT TSNARRKFFL DVDNCDAFVF NEGTTYNLQF
DTRFLKMEDS QYAVSIPTFG SKTFDVNVNN YANEHLNNFN FTVKQNGYEG VRYGTYGLVI
NFALLDEEGQ