Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_37241 |
Symbol | |
ID | 4841166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 652233 |
End bp | 653165 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640392481 |
Product | predicted protein |
Protein accession | XP_001386529 |
Protein GI | 126140014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.136249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGG TGCGCAGATT GCTAATTCGT GCTGCGAACA ACTACGATAA AGACTTCAAA GTAGTACCAA TAAACACCAA TACGCCTGTC GAGATCGATT CAGACATCGG CGTATTTCAA GTCTATGTTA ATACCAAGAA GTTTGATGGC TCTAAGCCTC ATTTAGACAA CAGTTTATAC GAATTGGGTG ACAATGTTTA TCTCAATGGC GAACCGGTAG ATGCCGACGT TACCGACGCT GACGAGCTCA CCAAACTAGT CAATTCCAAT ATGCGTATCA ATATCAAGTT CACACCCAAA GTGCCCATAA AGGGCTCCGA ATTGATCTTT GGGAACGATT TCACAGTTCC CATTAGGAAC CATGTGCCAA CGACACTTCT ATCTACGGGA CTCAAGTTCT TCCAGTGGTT CGTCAACAAG ACCGTGAGAG GCGATATCTA CGACGACGAA CCTTATCTCT ACGGGCTTGC CTTGAATAGT TTTACATACT TGGCTGTCGA TACCGATGGA GAACCGACAC AGAGACTCTC CGGACCTGCG TCATACTTGG CCCACAAGCC CTTGATGGAG TTCATCAACT ACATTGAGAA TCTCAACGAC AATCCTGACA ACACGCTAAA AATTCCTACG ACTTCCAACG CCCGTCGCAA GTTCTTCCTT GACGTTGACA ACTGTGATGC GTTTGTATTC AACGAAGGTA CAACCTACAA CTTACAGTTC GACACCCGAT TCCTCAAAAT GGAAGACTCG CAATACGCCG TAAGCATCCC TACGTTTGGA AGCAAGACAT TCGACGTCAA CGTGAATAAC TACGCCAACG AGCACTTGAA TAACTTCAAC TTCACTGTCA AGCAGAACGG CTACGAGGGT GTAAGATACG GCACCTATGG CTTGGTGATA AATTTCGCCT TGTTGGACGA GGAAGGACAG TAA
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Protein sequence | MTVVRRLLIR AANNYDKDFK VVPINTNTPV EIDSDIGVFQ VYVNTKKFDG SKPHLDNSLY ELGDNVYLNG EPVDADVTDA DELTKLVNSN MRINIKFTPK VPIKGSELIF GNDFTVPIRN HVPTTLLSTG LKFFQWFVNK TVRGDIYDDE PYLYGLALNS FTYLAVDTDG EPTQRLSGPA SYLAHKPLME FINYIENLND NPDNTLKIPT TSNARRKFFL DVDNCDAFVF NEGTTYNLQF DTRFLKMEDS QYAVSIPTFG SKTFDVNVNN YANEHLNNFN FTVKQNGYEG VRYGTYGLVI NFALLDEEGQ
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