Gene PICST_37224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37224 
Symbol 
ID4840924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp598212 
End bp599084 
Gene Length873 bp 
Protein Length290 aa 
Translation table12 
GC content44% 
IMG OID640392239 
Productpredicted protein 
Protein accessionXP_001386514 
Protein GI126139984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.445132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.242751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA GATATACTTT ACCTACATTT GAAACTGCCC AGCTTCCTGT AGTGCCAGCA 
GCCACGAGAA AGAACAACTA TGAAAGAGGT ATTGCACCAG GCGATTTGGT GTACATCACT
GAAGGCGAAA AGAAAGGAAC AGTGACATCT GTTTTCCATT ATAATCCTTC CAACGACGCT
GTGCTAGTAG CCAATGTCAC CGAGAAGAGA ATCACTCCCA AAACTACCTG GGTTGAAAAC
CAGAACAGTC ACTATGTAGA CTATCCTTCA TACTTGCCAA TGTCCAAAGT CAAGCTTGCT
GGTAAGGATA AAGATGATGA AGGTAAGGTT AGCTATGTAG TTGCTGACGA GATCGTCTTG
AAGGATAAGT ACTATGATGA CAGATACAAA AGATGGCTTC CCAAGAGATT CGTTAAGCAC
CACAGCAGTA TTGAAATTCC TTGGCCCAAC CCTCCTTCAG CTTTTGAAGA CGACGCATTA
TCCACACAAG AGCCAACTGT GTTTGAAAAG ACCTACGAGT TGCAGACCAT TGCTAAAGCT
CCTGTGCCTA AGGCTGCGTT GAATCAGTTG AGAAACCCAT ACTCCAAACA CAAGAAGAGA
GTGTTGTCGG AATTGCAAGC TAGAAGACTC AATAGTCCCG AAATGCCTCT TTCTGTGGAA
CAAAAGATTT ACTTGGCCAA ACAAGCATCC AAGCCCAAGA AGACTTACAC CAACTTGTCG
GAAGAAATCA AGGACTTCAT TGGTGACAAG ATGGCTCAGC ACATCAACAG CATTGACAAC
CCCGCCATGC TTGCTCATTT GGAAGCATTG TCGAGGGCCA AGGTTCCTGA CTTCGAAAAG
ACCATACAAA ATATCGAAGA CGAAAGCAAG TAG
 
Protein sequence
MNKRYTLPTF ETAQLPVVPA ATRKNNYERG IAPGDLVYIT EGEKKGTVTS VFHYNPSNDA 
VLVANVTEKR ITPKTTWVEN QNSHYVDYPS YLPMSKVKLA GKDKDDEGKV SYVVADEIVL
KDKYYDDRYK RWLPKRFVKH HSSIEIPWPN PPSAFEDDAL STQEPTVFEK TYELQTIAKA
PVPKAALNQL RNPYSKHKKR VLSELQARRL NSPEMPLSVE QKIYLAKQAS KPKKTYTNLS
EEIKDFIGDK MAQHINSIDN PAMLAHLEAL SRAKVPDFEK TIQNIEDESK