Gene PICST_37161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37161 
Symbol 
ID4840891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp334265 
End bp334660 
Gene Length396 bp 
Protein Length131 aa 
Translation table12 
GC content42% 
IMG OID640392206 
Productpredicted protein 
Protein accessionXP_001386651 
Protein GI126140258 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5262] Histone H2A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.990123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.458805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGTG GTAAAGGTAA AGCTGGTTCT TCTGAAAAGG CCTCAACTTC TAGATCAGCC 
AAGGCTGGAT TGACTTTCCC TGTTGGTAGA GTCCACAGAC TATTAAGAAA GGGAAACTAT
GCACAAAGAG TTGGTTCTGG TGCTCCAGTT TATTTGACTT CTGTCTTGGA ATATTTGGCT
GCTGAAATCT TGGAATTGGC CGGTAACGCT GCCAGAGACA ACAAGAAATC TAGAATCATT
CCAAGACATT TGCAATTAGC CATCAGAAAT GACGAGGAAT TGAACAAATT GTTGGGACAC
GTAACCATAG CACAAGGTGG TGTCTTGCCA AACATCCACC AGAACTTATT GCCAAAGAAG
TCCGGAAAGT CTGCTAAGGC ATCTCAAGAA TTATAA
 
Protein sequence
MSGGKGKAGS SEKASTSRSA KAGLTFPVGR VHRLLRKGNY AQRVGSGAPV YLTSVLEYLA 
AEILELAGNA ARDNKKSRII PRHLQLAIRN DEELNKLLGH VTIAQGGVLP NIHQNLLPKK
SGKSAKASQE L