Gene PICST_37156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37156 
Symbol 
ID4840885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp266846 
End bp267754 
Gene Length909 bp 
Protein Length302 aa 
Translation table12 
GC content42% 
IMG OID640392200 
Productpredicted protein 
Protein accessionXP_001386646 
Protein GI126140248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000192803 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCTAC TTCAAAAAAT CTTCCACGGG CAGACAAAGA ATATTGACTC CTTGGTACTT 
GAAAAGGGGT TTGAGGTATC TTCATGCTCA TCTGAATGTT CTAGTTGTAC GTCCAACTTT
CCGAAGTCTC TTTCGTTTGA CAACGATGCT TATCTCTGGG AATCAACAAA ACCTTATGGT
CTCCATATTG TGGTTCCAAC AGGCAAAACA GACTGGCCCC ATGATGCCTG TGGTGTTTCT
GGTACATTTT CGAAACAAGT GAGCGAGTGG GGGGGCCATA GCAGTGGCAA ATTTCCGGAA
ATAGGCTCGA TTAAAGTTAC CGTCTCGTCA CTTTCTTCAG ATGATCTTCT CACCAACGAT
GAATATTGCA ATGAGAAAAG AGGCGATGTC CTCTTACTTC CATTTTTTGT ATGGGTAAGA
AACGTATCAA TAGCCCAAGT TAACCCTGTT TTGGATGCAG TGGTAGCCAG CTTAGTTGCT
AGCCGCAAGA ATTCGGTCAA AGAAATCCAG TTATCATACC CACAGTTTCC TAGTGTTAAG
ATAGAGGTGG ACAGTAATCA ATCGTACGTC TTCTTTTGTT CTCATAAATC AAGAGACAAG
CGTTGTGGTG TCACAGCTCC CATCATGAAG AAGGAGATGG ATATTTACCT ACGTGATCTT
GGTTTATACA GAGATGTTGG AGATAATACC CCAGGTGGCG TCAAGGTTGC GTTTATTAAC
CATATTGGTG GTCACAAGTA TGCTGCGAAC GTAATCATCT ATTTAAGGAA GTCCGGCAAG
AATATTTGGT TGGCAAGGTG CAAACCCAAT AATGTTCGTC CCATTGTCGA TGAATGTATT
GTTAATGATG GTAAGGTATG GCCGGAAAAG ATTAGATTAA TTCAAAAATT TGATTCTATA
GAATGGTAG
 
Protein sequence
MGLLQKIFHG QTKNIDSLVL EKGFEVSSCS SECSSCTSNF PKSLSFDNDA YLWESTKPYG 
LHIVVPTGKT DWPHDACGVS GTFSKQVSEW GGHSSGKFPE IGSIKVTVSS LSSDDLLTND
EYCNEKRGDV LLLPFFVWVR NVSIAQVNPV LDAVVASLVA SRKNSVKEIQ LSYPQFPSVK
IEVDSNQSYV FFCSHKSRDK RCGVTAPIMK KEMDIYLRDL GLYRDVGDNT PGGVKVAFIN
HIGGHKYAAN VIIYLRKSGK NIWLARCKPN NVRPIVDECI VNDGKVWPEK IRLIQKFDSI
EW