| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37145 |
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| Symbol | HRT1 |
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| ID | 4841091 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 223244 |
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| End bp | 223722 |
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| Gene Length | 479 bp |
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| Protein Length | 113 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640392406 |
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| Product | Skp1 Cullin-F-box ubiquitin protein ligase (SCF) subunit |
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| Protein accession | XP_001386442 |
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| Protein GI | 126139840 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5194] Component of SCF ubiquitin ligase and anaphase-promoting complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCTA TAGAGGAACA ACAAGTTCAG CAAACATCTA CAGAGGAAGT GTCCAAGTCC
AAAAACGGCA GGCAAAGATT TGAAGTGAAA AAATGGACAG CCGTAGCCTT CTGGTCATGG
GGTAAGTATT ATGTGAAAGT TCATTGAATA ATGAGTTCAT TTTGATGTTG ATATTAAGCC
TGGATAGTTA TTCATTGAAA TTTTCATTGT GTTTATGATT CATCATAATT CATCTTGATT
CCGTACTAAC ATTCATAGAT ATCCAAATTG AAAACTGTGC CATCTGCAGA AACCATCTTA
TGGAACCATG TATCGAGTGT CAGCCCAACT CCATGAACAA CGGCCAGGAA GAGTGCATTG
CTGCTTGGGG TGTGTGTAAC CACGCCTTCC ATTTGCATTG TATCAAGAGA TGGTTGAAGA
CTAGAAACGC ATGTCCTTTG GACAACACAG AGTGGACATA CCAGAAGTTT GGCTCCTAG
|
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| Protein sequence | MKPIEEQQVQ QTSTEEVSKS KNGRQRFEVK KWTAVAFWSW DIQIENCAIC RNHLMEPCIE
CQPNSMNNGQ EECIAAWGVC NHAFHLHCIK RWLKTRNACP LDNTEWTYQK FGS
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