| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33982 |
|---|
| Symbol | |
|---|
| ID | 4841115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 930902 |
|---|
| End bp | 931849 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640392430 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386765 |
|---|
| Protein GI | 150866979 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCC GCTTGGTTGG TTTCAGCATT GGTTCGAGTT CCAACATAGA ACAGTCGAAG
ACGGCGTCTC ACCGACAATC ATATGACGAC GAAAATCAGT CCATAGAGTT GCTGCTGTTC
GGCAAACGAC CACTGATGTT TGTTAGTAAA CCTGGTTCTC TTCTTCGTCA ATCATTGATT
CAGATCAATC CAAACTCACT CGAGAATAAT GCTTCTTTCG ATTCATCGGC TTTGTTATCA
ACAGTGAAGA ATGCTACTAT CACCAGCAAC AACTCGAGCA TCTCATTGGA ACAAGCAAAC
TACGATATCG AAATTAAGAA GCCGCCCAGG TTCCCCCTTC CGGAAAAGGC AAACACACAG
CAGGAGTACG GAACTTCTTC TACTACAGAC GAAGTGTACT ACGAGGCTTC GCTTGTTCTC
CAGCAAGAAA TTGTACCTCC GACTTCAAAC AATTCAATTG TGGTCCCCAA ATCTCTTTTT
CAAACTCATA CTGCCATAGA CAGCTTACCT ACCAAGTACT ATCCCACTTT ATTGCTGGAG
AGAATCCCGC CAGTAGTATC TGTCCAAATC CAGCCTCAAA TGAGAAGAGA ATTGTCCAAA
GACAGAACAC CTTTGGATTA TAAAAAACTC AGTCTGTCCT TCAGTTTTGC GGATGATCAT
TGCTTTGCTG CTCCACTATG CGAGAGAGCA AATGCATTGC ATGAGGAGCA AGCGTTGTTA
CATATTCTTG AGTTCGAAAT GGAGAACCTC AGCCCAAGTG GAAACATGAA GAAAGACTTC
TGGAAACAAT TTGTAACAGG ATTTATGTCT TTTTTTCACT TTTCAACCGA AGACTATTAC
GAAATGTATC CTTGGGCAAA ATATACAATC CGAGACCACT CGGTGCCTTC AATTGGAAAG
AATCATGAAG TGGACTTGGA CGACGTCTAT GTCTTCATTT ACATGTGA
|
|---|
| Protein sequence | MSSRLVGFSI GSSSNIEQSK TASHRQSYDD ENQSIELSSF GKRPSMFVSK PGSLLRQSLI
QINPNSLENN ASFDSSALLS TVKNATITSN NSSISLEQAN YDIEIKKPPR FPLPEKANTQ
QEYGTSSTTD EVYYEASLVL QQEIVPPTSN NSIVVPKSLF QTHTAIDSLP TKYYPTLLSE
RIPPVVSVQI QPQMRRELSK DRTPLDYKKL SSSFSFADDH CFAAPLCERA NALHEEQALL
HILEFEMENL SPSGNMKKDF WKQFVTGFMS FFHFSTEDYY EMYPWAKYTI RDHSVPSIGK
NHEVDLDDVY VFIYM
|
|---|
| |