Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33961 |
Symbol | |
ID | 4840856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 873434 |
End bp | 874285 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392171 |
Product | predicted protein |
Protein accession | XP_001386583 |
Protein GI | 150866853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0111936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATG AGCTACTCAG AATCAAACAG CTTGATTTGA TACGGCTGAA GATGCAGACT GTGAAAGACC AGCTGCTGAG ACGAGATAAA ATGAACGAGT ATTTAGAGAG CAGCCATTTC AGATTCCAAC AAGAGAAACA GAGTATTCTG TTGAATAAAT TAAAAGAAGC CATGCAGCTT GTTTATCCTC AAGAGCATCC ATTAGTGTCA ATAGACGTAG AAGCATACGA GAGAAGTTTG GGTAAAGTAA CAGAAATAGG AGTAGTCATC TACGATCCGC AGGTTCTGCC AGGGTCTGCG GTGCCACTAC TAAAGCCTTA CCATATCATT ATTCAGGAGA ATCTCAAATT GGTCAATGGC CGCTATGTTC CAGACAAGAA GGACCGGTTC ATGGGCGGCA CTTCTCATGT TCTTCGCAAG AAAGATGCAG AGATGTTTGT GCTGGCCGTC ATAGAAAAGT ATATAAACGG TAGAAATGGA GTATTGGTAG GGCACCACAT TGAAGGAGAT GTCAAATGGC TCCGAAGCAT AGGAGTTAAC ATTAAGAATG ACACTGCTGT AGTTGACACG TTCAGGCTCT TTGCGATATC GAGATCAAGT GGCGGAACAC TTCGTGGAGT GTTACGAGAG ATCAATGTAC CGCATGGAAA TCTCCATAAT GCTGCGAACG ATGCCTACTA TACGTTAATC GCAGCCATGA CGTACTGTGA CCCACATCAT CGACTTGAAA AGAACTTGGA CCAATTTGTC CACATGGAGA AGAAGCTGGC TGTGGATAAG AAGATGGACT TGTTTTCAGA CAGAGCGACG TTCAGAAAGA CGACTGCAGA AGAATTGATC CAGCTGCTTT GA
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Protein sequence | MEDELLRIKQ LDLIRSKMQT VKDQSSRRDK MNEYLESSHF RFQQEKQSIS LNKLKEAMQL VYPQEHPLVS IDVEAYERSL GKVTEIGVVI YDPQVSPGSA VPLLKPYHII IQENLKLVNG RYVPDKKDRF MGGTSHVLRK KDAEMFVSAV IEKYINGRNG VLVGHHIEGD VKWLRSIGVN IKNDTAVVDT FRLFAISRSS GGTLRGVLRE INVPHGNLHN AANDAYYTLI AAMTYCDPHH RLEKNLDQFV HMEKKSAVDK KMDLFSDRAT FRKTTAEELI QSL
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