Gene PICST_33937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33937 
Symbol 
ID4841121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp825356 
End bp825850 
Gene Length495 bp 
Protein Length164 aa 
Translation table12 
GC content45% 
IMG OID640392436 
Productpredicted protein 
Protein accessionXP_001386573 
Protein GI150866844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.120328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA ATTCCAGATC AGATACTGAC TACGATTCAA ATACTGGTAG AGCCGATTCC 
GGAACCAATT ACGAGCCCAA TTCTGGTTGG GGTGCGGATG GCAAGACGCA GATAAAATCA
CACTATGTGG CTATATTATT AGTGATAGCA GCAGGTTTAC TCTTGTTCCA TTTCAGACAC
AAGCTTGCAG AAGCGCATGA CAGATGGAGA ACACGTAGAA GAGCAGCGTC TGGATTCTAT
GAGAGACTTG GAACTTTCCA GGATAATATA GCTGCTGGAT TTCTGAGTGC CAACTTTGAT
CTTGAAGCCA ATGTAGCTGG CGGAGACACT AGAAAAGGTC TTCTGGAGGA AGCATTGGCT
GAAATTCAAC GCATTATGGA TTCTAAGAGA AAGACCTTTG ATGAGGCCAG ATTGGAGTAT
ACTCAGAGCG AACTTGGACG TAACGGCGTA GATAAGGACG GAGTTCCCTT GGATCCCAAG
CTAGTGACGT TCTAG
 
Protein sequence
MSFNSRSDTD YDSNTGRADS GTNYEPNSGW GADGKTQIKS HYVAILLVIA AGLLLFHFRH 
KLAEAHDRWR TRRRAASGFY ERLGTFQDNI AAGFSSANFD LEANVAGGDT RKGLSEEALA
EIQRIMDSKR KTFDEARLEY TQSELGRNGV DKDGVPLDPK LVTF